Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01155 ATGATGAAAGTTGGGTTTGAGGTTGTTCATGGAAATTCAAACATGATCATCAACCGTTCCTCTATGCATGAAACTTGGGACTATTCAAATCTTGTTTCTTTGCCACCTCCAATCCCATCAATCCAATTTCCAATAAAGCCCTCACCAAATGAAAACCAACAAAATGAAACATGTGATTGGGTTGACAACATTGCCAAGCACCTTAGTGTCAATGTTGATGAAGACTTACCACAACAAACAGCTAATGATGATAATCATAATAATAGCTTGTTATTATTGTCCAATAATAATCCTTCATCAATTCACGACCCCAACTTCAATCCAATAAGAAAAAACACTTTTTGGAAAACCCCATTTGATCCTTGCACCAATATTGACCCTCCTAGCACCAATAACTTTGGTCTTCATCAAATTCAATCAAACACCTCAAATTTAGACCATAATATTATTATTAACCACAATAGTAGTAGTAGTAATAATAATAACAATAATATCCATGATCAAGGTTTGAATTTGATTACCCTTCTAATGGAATGTGCTGTGGCAATCTCTGTGGACAACCTTGTTGATGCTCAAAGGATGTTGTTGGAGCTAACACAATTGGCGTCACCTTACAAGGCATCATGTGCTGAAAGAGTTGTTGCATATTTTGCAAAAGCCATGAATAGTAGGGTCATGAATTCTTTTCTTGGTGTGTGTTCACCTTTGATTATTGATCACAAGAGCATTCATTCATCATTCCATGTTTTCAACAATGTTTCCCCTTTCATCAAATTTGCACATTTCACTTCCAACCAAGCAATTCTTGAGGCAGTGAATAGGTGCCAATGCATACACATCATTGATTTGGACATCATGCAAGGCCTTCAATGGCCAGCATTCTTCCACATTCTTGCCACAAGATTTGAGGGTCCACCCGAGGTCACAATGACCGGTATCGGCGCATCCATGGACCTCCTTGTCGAGACGGGGAAACAGCTCTCGAATTTCGCCAGACGGCTTGGAATGCCATTGAAATTCCACCCTGTCGTGGCGAAATTTGGGGAAATTGACGCATCTATGGTGCAAATTAGGTCTTGTGAGACGGTGGCGGTTCATTGGTTGCAACATTCAATGTACGATTCAACCGGGCCGGACTGGATGACCTTGAGACTAATAAAGGAATTGGAGCCAAGAATCATCACATTAGTAGAACAAGATGTAAACAATGGAGGATCATTCTTGGATAGGTTTGTTGGATCATTGCACTACTACTCAACAATATTTGATTCCCTTGGTGCATACTTGGAAATTGATGATCCTAATAGGCACAATGTTGAGCATGGAGTGTTGTCTAGGGAGATCAACAACATATTGGGCATAGGTGGACCATCAAGGAGTGGTGAGGAAAAGTTTATTAGGCAATGGAGGAATGAACTCATTTCAAGGAACAATTGGTTTGTGCAAGTTCCAATGAGTGCTAATTCAATGGCTCAAGCACAATTGATACTTAATATGTTCTCACCACCACATGGTTATAGCCTTGCTCATGTTGATGGCACTTTGAGGCTTGGTTGGAAGGATACTAGCTTGTACACTGCTTCTGCATGGACTTGTAATGCTTTTAGCTAG 1611 0.4004 MMKVGFEVVHGNSNMIINRSSMHETWDYSNLVSLPPPIPSIQFPIKPSPNENQQNETCDWVDNIAKHLSVNVDEDLPQQTANDDNHNNSLLLLSNNNPSSIHDPNFNPIRKNTFWKTPFDPCTNIDPPSTNNFGLHQIQSNTSNLDHNIIINHNSSSSNNNNNNIHDQGLNLITLLMECAVAISVDNLVDAQRMLLELTQLASPYKASCAERVVAYFAKAMNSRVMNSFLGVCSPLIIDHKSIHSSFHVFNNVSPFIKFAHFTSNQAILEAVNRCQCIHIIDLDIMQGLQWPAFFHILATRFEGPPEVTMTGIGASMDLLVETGKQLSNFARRLGMPLKFHPVVAKFGEIDASMVQIRSCETVAVHWLQHSMYDSTGPDWMTLRLIKELEPRIITLVEQDVNNGGSFLDRFVGSLHYYSTIFDSLGAYLEIDDPNRHNVEHGVLSREINNILGIGGPSRSGEEKFIRQWRNELISRNNWFVQVPMSANSMAQAQLILNMFSPPHGYSLAHVDGTLRLGWKDTSLYTASAWTCNAFS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01155 536 ProSiteProfiles GRAS family profile. 163 531 IPR005202 -
Arst2g01155 536 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 152 527 IPR005202 -
Arst2g01155 536 Pfam GRAS domain family 172 531 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01155 Arst-Chr2 15440450 15442535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01155 167 531 GRAS Transcription Factor Family AT3G54220 52.022 6.63e-127 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst2g01155 GRAS 5.5e-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01155 - - gmx:100775656 677.552