Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01107 ATGCATATAGGTCAAACAGATACAACTTCAGTGAAATGTCTAATCAACAGCATATCTCGATTCCTTCATCTGGTTTCTTGCCAAATCGTGAAGCCTGCGCCTTTTCAGAAGATCTGTCATAATATGGTCGGGGTGTTAAAGCGACTGAAGCCAGTGCTTGATGATGTAATGGACTACAAACTCCCGTTTCACCAAAATATGTCTAAAGAGTGTGAAGAATTGGATGTGCGGATCAATGAAGCTAGAGACTTCATCGAAAAATGGGGTCCAAAGATGAGCAAGATTCTTAGTGTTATTCAAAGCAGCACATTGTTGATTAAGTTGCAGAGCACATCACTTGACATATGTCACATGATAGTTAGATCCCTACAGTCACCTCCGTCTGCTTCGGTTTTGGCTAATCTTCAGAACTATATCCAGGAACTTCAGTGCCTCGAGAAGGAAACAGCAATGGTTTATATAGAAGAAGCACTAAGAAACCAAAGAGATAATGTTCAACCTTCCAACGAGCTTCTGAAGGAAATAGCCGAGTTACTAAAATTGACCTCAAATGAGGAGCTCTTGAAAGAAAGTATCGTCGTGGAAAAGGAAAGGTTGAATGCTGAAGTCAATAAAATGAAAGGGGACTTGGATGAAATCAATGAAATTGTGAATCTTGTCCGCAATTTACGCGATTATGTAATGAGAACTGAGTCTCTTGAAGTCAAAACCGGTCTCTCAATCCCTCCATACTTCCGCTGCCCTTTATCATTGGAACTCATGATGGATCCTGTTATTGTGGCTTCGGGTCAAACATATGACAGGCAATCAATCCAAAAGTGGCTAGATAACGGGCTAAATGTTTGTCCCAAGACTCGTCAGAAGCTCAATCATATGAATCTTACTGCCAATTATACTGTCAAAGCTATGATTGCAAATTGGTGTCAGGAAAACAGTGTTAAGCTTTGTAGTAACTCGCTGCTCGATAAATCTTCTTGTATCACAACCCCTGCAGATCATTCATTGCCTCATGATTTAGCTAATAAATGTGGTTTCAAGTCTATGAATATCGATTCCATCTCAAGGTCATCTCTTCAAAATGGAAATGGAAATGAGAAACCAAAGGCTGATAATTTTGTCAGATCAAGTGAAGAGTATAATGGATGCCGGAGCGGAACAGTGGAAAGATGTGATCAGCAATCATCCGATGTTCACAGCAGAAGTGAATCATCATTTTCAAGTTCAATATCTAGTACTGATTGCATACTTCCAGTTTCAGGACAGGCATCCGGAATATCCGATAAGCCGCAAAATGTTGACAATGTTGTTGGGAACAAACAAAGTCCTGCATCGAGAATCCAAGGGACGAGAAATGATAATCTTATTATGAACAATAATAACATTAATACTAGTGCTAAGCAAAATGATTCAAGAGTTGATTCACATCCTATATTGAACTCGGGGGCTGGTGAAGTGGCCACTTCATCTCATGTTAATAAGTTGATTGAAGAACTTCGCAGCCAATCAGTTGAAGTGCAAACCATAGCTGCAGAAGAATTGAGGCTTCTTACAAAGAATGACATGGAAAACCGAATTATTGTGGGGCGGTGTGGGGCTGTTGAGCCTTTACTTTCGCTTCTGTATTCGGACATGAAGATAACACAAGAGCATGCTGTGACAGCTCTGTTAAATTTGTCAATCAATGAAGATAACAAGACTTTGATTATGGAAGCTGGAGCCATAGAACCTCTTATCCATGTTTTGAAGACAGGAAATGATGGTGCTAAAGAAAATTCTGCGGCAGCACTATTCAGCCTCTCTGTAATAGAAAACAACAAAGAAAAAATCGGCCGATCCGGCGCAGTCAAAGCCTTGGTGGATCTTCTTGCCTGGGGAACTCTTAGAGGGAAAAAGGATGCTGCTACTGCTTTATTTAACTTGTCAATATTTCATGATAACAAAGCTCGAATAGTTCAAGCTGGAGCTGTGAAGTTTCTGGTTCGGTTGATGGACTCTGCGGATGGAATGGTTGACAAGGCTGTTGCACTTCTGTCAAACCTGTCAACAATTCCAGAGGGCCGGATAGAAATCGCAAGGGAAGGAGGCATCCCCTTATTAGTTGAAATTGTTGAAACAGGTTCACATAGGGGAAAGGAGAATGCTGCTTCTGTTCTGTTACAGTTATGCCTTCATAGTACCAAGTTTTGTATTCTTGTTTTGCAAGAAGGAGCTGTACCTTCCCTAGTTGCATTATCTCAATCCGGTACGCCGAGAGCCAAGGAAAAGGCACAACAACTTCTCAGTCATTTTCGCAATCAGCGTGAAGGAGCTGCTGCGAAGGGAAAATCATGA 2331 0.411 MHIGQTDTTSVKCLINSISRFLHLVSCQIVKPAPFQKICHNMVGVLKRLKPVLDDVMDYKLPFHQNMSKECEELDVRINEARDFIEKWGPKMSKILSVIQSSTLLIKLQSTSLDICHMIVRSLQSPPSASVLANLQNYIQELQCLEKETAMVYIEEALRNQRDNVQPSNELLKEIAELLKLTSNEELLKESIVVEKERLNAEVNKMKGDLDEINEIVNLVRNLRDYVMRTESLEVKTGLSIPPYFRCPLSLELMMDPVIVASGQTYDRQSIQKWLDNGLNVCPKTRQKLNHMNLTANYTVKAMIANWCQENSVKLCSNSLLDKSSCITTPADHSLPHDLANKCGFKSMNIDSISRSSLQNGNGNEKPKADNFVRSSEEYNGCRSGTVERCDQQSSDVHSRSESSFSSSISSTDCILPVSGQASGISDKPQNVDNVVGNKQSPASRIQGTRNDNLIMNNNNINTSAKQNDSRVDSHPILNSGAGEVATSSHVNKLIEELRSQSVEVQTIAAEELRLLTKNDMENRIIVGRCGAVEPLLSLLYSDMKITQEHAVTALLNLSINEDNKTLIMEAGAIEPLIHVLKTGNDGAKENSAAALFSLSVIENNKEKIGRSGAVKALVDLLAWGTLRGKKDAATALFNLSIFHDNKARIVQAGAVKFLVRLMDSADGMVDKAVALLSNLSTIPEGRIEIAREGGIPLLVEIVETGSHRGKENAASVLLQLCLHSTKFCILVLQEGAVPSLVALSQSGTPRAKEKAQQLLSHFRNQREGAAAKGKS 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01107 776 Pfam Armadillo/beta-catenin-like repeat 561 600 IPR000225 GO:0005515
Arst2g01107 776 Pfam Armadillo/beta-catenin-like repeat 522 559 IPR000225 GO:0005515
Arst2g01107 776 CDD RING-Ubox_PUB 242 291 IPR045210 -
Arst2g01107 776 MobiDBLite consensus disorder prediction 355 374 - -
Arst2g01107 776 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 654 695 IPR000225 GO:0005515
Arst2g01107 776 Gene3D - 566 774 IPR011989 -
Arst2g01107 776 ProSiteProfiles U-box domain profile. 240 314 IPR003613 GO:0004842|GO:0016567
Arst2g01107 776 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 613 655 IPR000225 GO:0005515
Arst2g01107 776 SUPERFAMILY RING/U-box 239 316 - -
Arst2g01107 776 Coils Coil 128 148 - -
Arst2g01107 776 MobiDBLite consensus disorder prediction 387 457 - -
Arst2g01107 776 Pfam U-box domain 241 312 IPR003613 GO:0004842|GO:0016567
Arst2g01107 776 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 572 614 IPR000225 GO:0005515
Arst2g01107 776 SMART Ubox_2 244 307 IPR003613 GO:0004842|GO:0016567
Arst2g01107 776 FunFam RING-type E3 ubiquitin transferase 240 314 - -
Arst2g01107 776 PANTHER U BOX DOMAIN-CONTAINING 34 764 - -
Arst2g01107 776 Gene3D - 439 565 IPR011989 -
Arst2g01107 776 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 315 IPR013083 -
Arst2g01107 776 SMART arm_5 683 723 IPR000225 GO:0005515
Arst2g01107 776 SMART arm_5 602 642 IPR000225 GO:0005515
Arst2g01107 776 SMART arm_5 520 560 IPR000225 GO:0005515
Arst2g01107 776 SMART arm_5 561 601 IPR000225 GO:0005515
Arst2g01107 776 SMART arm_5 643 682 IPR000225 GO:0005515
Arst2g01107 776 Coils Coil 196 216 - -
Arst2g01107 776 SUPERFAMILY ARM repeat 489 763 IPR016024 -
Arst2g01107 776 FunFam RING-type E3 ubiquitin transferase 475 769 - -
Arst2g01107 776 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 531 573 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01107 Arst-Chr2 14128018 14132801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01107 7 776 U-box Gene Family AT3G54790 51.403 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01107 - - gmx:100800949 1088.17