Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01096 ATGCCATCTCTCCCGTCCCCGGCGGGGAGAATCCACCGCCTGGAAATGGAGAATTTCAAGTCCTACAAGGGCCACCAAGTAATCGGCCCCTTCTTCGACTTCACCGCCATCATCGGTCCCAACGGCGCCGGAAAATCGAACCTCATGGACGCAATCAGCTTCGTCCTCGGCGTCCGCACCGGCCAACTCCGTGGTGCGCAGCTGAGGGACCTCATCTACGCCTCCGACGACAAGGAGAAGGAGCAGAAGGGACGCAGGGCATTCGTTCGGCTCGTCTACCAGCTCAACAACAATAACGGTAGTAACGGTTCGGACACCGAGATCACGTTCACTCGAGCCATCACCAGCGCCGGCGCCAGCGAGTACCGAATCGACGGTAACGTTGTCACTTGGGATGTTTATAATGCCAAGCTTAAGTCCCTTGGGATACTTGTCAAGGCTCGCAATTTTCTCGTCTTTCAGGGTGATGTAGAATCCATTGCATCAAAAAACCCAAAGGAACTTACTGCCCTTCTCGAGCAGATATCTGGCTCTGATGAGCTCAAGAGGGACTACGAGCAATTTGAAGAAGAAAAGGGTGCAGCTGAAGAAAAATCAGCACTTGTCTATCAGAAGAAAAAGACAGTGGTGATGGAGAGAAAACAGAAGAAAGAACAAAAAGAAGAGGCAGAGAAACATCTCCGACTGCAAGAACAACTGAAATCTATAAAGAAAGAACATTTCCTGTGGCAGTTGTTCAATATAGAAAAGGATGTTGCTAAAACAAACGAGGAGCTTGATGAGGATGAAAAACGGCGTAAAGAAGTTATGGAAGAACTAGAAAATTTTGAACATGAGGCTAGTAAAAAGAAAAAGGAGCAGGCTAAATATCTGAAAGAGATTGCGTTACGTGAAAAGAAAATTACGGAGAAAAGTAGTAGACTTGACAAGAGTCAACCTGAGCTCCTCAAGCTGCGGGAGGAGATTAATCGTATAAATTCAAAAATTAAGAAAAGCAATAAGGAGCTTGAAAAGAAAAGAGCAGAACGGAGGAGACATGCTGATGATATAGAAGAGCTACAGAAGGGCATACAGGATCTTACAGCAAAAATGGCAGCCCTACAAGAAAGGGGTCGAGATGTTCGTGATAAACTACAGTTAGATGGTGATGACTTGGAAGAATATTTTCAAATCAAGGAAAAAGCTGGAATGAAAACTGCAAAGCTAAGAGAGGAGAAAGAGCTTCTAGATAGGCAGCAGCATGCTGATAGTGAAGCTAAAAAAAATTTGGAAGAAAATCTTCAACAGTTGGAAAACAGGGTGTCTGAGTTGGATTTGCAAGAAACACAGATGAAGACAAGGCTTAAAAAAATTCTTGGTGGTTCTGAAGGAAACAAGAATGAGCTTGAGAAACTGAAAAAGGAACTGCGTGTGATGGAGGAGAAACATCGTGATTCTAGGACTAAACATAAAAGCTTGGAGCTAAAAATTAGTGAAATAGAAAATCAGCTACGTGAATTGAAGGCTGATAGATATGAAAATGAGAGAGATGCTAGGCTGTCTCAGGCTGTGGAGGCTCTGAAACGCCTATTTCAAGGGGTCCATGGCCGCATGACTGATCTTTGCAGGCCAACACAGAAGAAGTATAACCTTGCTGTTACTGTTGCTATGGGTAAATTTATGGATGCAGTTGTAGTTGAAGATGAAAAGACTGGAAAGGAATGCATCAAGTATTTGAAAGATCAAAGGCTTCCTCCTCAGACATTCATTCCTCTGCAATCAATTCGAGTGAAGCCAATCATGGAAAGATTGCGCACATTAGGGGGTACAGCGAAACTGGTTTTTGATGTGATTCAGTTTGATCCTTCCTTGGAGAAGGCAATTCTCTTTGCTGTGGGAAATACTCTTGTTTGTGATGATCTTGAGGAGGCAAAAGTTTTAGGCTGGAGTGGTGAGAGGTTTAAAGTTGTGACTGTGGACGGAATTCTGCTGACAAAATCCGGCACGATGACTGGTGGCACTAGTGGTGGAATGGAAGCAAGGTCAAAACAGTGGGATGACAAGAAAATTGAAGGACTTAACAAAAAGAAAGAGCAGTATGAATCAGATTTGGAAAAACTAGGATCAATAAGAGATATGCACCTCAAAGAGTCTGAAGCTGCTGGCAAAATTAGTGGACTCGAGAAGAAAATCCACTACGCTGATATTGAGGAGAAAAGCATCAAAGACAAGCTTAGAAATTTGAGCCACGAAAAAAAGAACATCAAAGAAGAAATTGGTCGTATGAGTCCGGAACTCCAGAAGTTAAGAGATGCTGTTGATAAGAGGAAATCAGAAATAAGTATGCTCGAGATGAATATAAATAAAATAACAGATGGGATTTACCAAGAATTTAGCAAGAAAGTTAAGGTTGCAAATATCCGTGAATATGAAGAAAACCGACTCAAAGATGCTCAGAGTGTTGCGGAAGAGAGGCTAGATCTGAGTAGCCAAATTTCAAAATTAAAATATCAATTGGAATATGAGCAAAATAGGGACATGAGTTCAAGAATTCAAGAGCTAGAATCATCCCTGGATACTTTACAGAATAATTTAAAACGGGCACAGAACAAAGAAGCTGAAGTAAAGTTGGCTACCGAGAATGCTACCGAAGAGATTGACCAGCTTAAGAAAGAAATAAAAGAGTGGAAATCAAAGTCGGAAGATTGTGAGAAAGAAATCCAAGAATGGAAAAAGCAGGCTTCGTCAGCCACAACAAACATATCCAAACTTAATCGTCTGATAAACACCAAGGAGGCACATATTGAGCAGATGATTGTACAAAAACAGGAAATATTAGATAAGTGTGAATTTGAACAGATTAGCCTTCCAACCATATCTGACCCGATGGATACCGGCACCTCAACCCCAGGTCCAGTTTTTGATTTTGATCAGCTAAGCAGGGCACTGAAAGATAAGCACTCTGACAGGGATAAAATTGAGGTGGAATTTAAACAAAAAATGGATTCCTTGGTATCTGAAATTGAGAGAACAGCACCAAATTTGAAGGCATTGGACCAATATGAGGCTCTTCTTGAAAAGGAAAAAGCTGTAACTGAAGAGTTTGAATTGGTGAGGAAAGAAGAGAAGGAGAAAGCTGATAGATTCAATTCAGTTAAGCAAAGGAGGTATGAATTGTTCATGGATGCTTTCAACCATATATCGGGCAATATAGATAAAATTTACAAACAACTCACAAAGAGTAGCACACATCCGCTGGGTGGAACAGCATATTTAAACTTGGAAAATGAAGACGATCCTTTCCTACACGGCATCAAGTACACTGCTATGCCCCCAACAAAGCGCTTCCGTGATATGGAGCAGTTATCTGGTGGGGAGAAAACTGTTGCTGCTCTTGCTTTGTTATTTTCCATCCACAGCTACAAGCCTTCACCATTTTTCATATTGGATGAAGTCGATGCTGCATTGGATAACTTGAATGTCGCTAAGGTTGCTGGATTTATCCGTGCAAAGTCTTGTGAAGGAGCAAGGGTTAGCCAGGATGCTGATGGGGGCAACGGTTTCCAGAGTATTGTGATATCACTGAAAGACAGCTTTTATGACAAAGCTGAAGCCTTAGTTGGTGTTTACAGGGACTCTGAAAGAGGTTGTTCGAGGACTCTCACGTTTGATCTGACTAAATACCGTGAGTCATAG 3675 0.4207 MPSLPSPAGRIHRLEMENFKSYKGHQVIGPFFDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGAQLRDLIYASDDKEKEQKGRRAFVRLVYQLNNNNGSNGSDTEITFTRAITSAGASEYRIDGNVVTWDVYNAKLKSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKRDYEQFEEEKGAAEEKSALVYQKKKTVVMERKQKKEQKEEAEKHLRLQEQLKSIKKEHFLWQLFNIEKDVAKTNEELDEDEKRRKEVMEELENFEHEASKKKKEQAKYLKEIALREKKITEKSSRLDKSQPELLKLREEINRINSKIKKSNKELEKKRAERRRHADDIEELQKGIQDLTAKMAALQERGRDVRDKLQLDGDDLEEYFQIKEKAGMKTAKLREEKELLDRQQHADSEAKKNLEENLQQLENRVSELDLQETQMKTRLKKILGGSEGNKNELEKLKKELRVMEEKHRDSRTKHKSLELKISEIENQLRELKADRYENERDARLSQAVEALKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDEKTGKECIKYLKDQRLPPQTFIPLQSIRVKPIMERLRTLGGTAKLVFDVIQFDPSLEKAILFAVGNTLVCDDLEEAKVLGWSGERFKVVTVDGILLTKSGTMTGGTSGGMEARSKQWDDKKIEGLNKKKEQYESDLEKLGSIRDMHLKESEAAGKISGLEKKIHYADIEEKSIKDKLRNLSHEKKNIKEEIGRMSPELQKLRDAVDKRKSEISMLEMNINKITDGIYQEFSKKVKVANIREYEENRLKDAQSVAEERLDLSSQISKLKYQLEYEQNRDMSSRIQELESSLDTLQNNLKRAQNKEAEVKLATENATEEIDQLKKEIKEWKSKSEDCEKEIQEWKKQASSATTNISKLNRLINTKEAHIEQMIVQKQEILDKCEFEQISLPTISDPMDTGTSTPGPVFDFDQLSRALKDKHSDRDKIEVEFKQKMDSLVSEIERTAPNLKALDQYEALLEKEKAVTEEFELVRKEEKEKADRFNSVKQRRYELFMDAFNHISGNIDKIYKQLTKSSTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRAKSCEGARVSQDADGGNGFQSIVISLKDSFYDKAEALVGVYRDSERGCSRTLTFDLTKYRES 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01096 1224 Pfam RecF/RecN/SMC N terminal domain 11 1205 IPR003395 -
Arst2g01096 1224 SMART SMC_hinge_2 525 641 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Arst2g01096 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 973 1207 IPR027417 -
Arst2g01096 1224 Coils Coil 178 198 - -
Arst2g01096 1224 PIRSF SMC 9 1221 IPR024704 GO:0005524|GO:0016887
Arst2g01096 1224 CDD ABC_SMC1_euk 11 165 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Arst2g01096 1224 Coils Coil 455 510 - -
Arst2g01096 1224 Coils Coil 315 377 - -
Arst2g01096 1224 Coils Coil 413 447 - -
Arst2g01096 1224 Pfam SMC proteins Flexible Hinge Domain 525 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Arst2g01096 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 285 IPR027417 -
Arst2g01096 1224 Gene3D - 484 593 - -
Arst2g01096 1224 FunFam Structural maintenance of chromosomes 1A 10 232 - -
Arst2g01096 1224 Gene3D - 8 219 IPR027417 -
Arst2g01096 1224 Gene3D - 952 1223 IPR027417 -
Arst2g01096 1224 SUPERFAMILY Smc hinge domain 489 690 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Arst2g01096 1224 Coils Coil 245 293 - -
Arst2g01096 1224 Coils Coil 837 920 - -
Arst2g01096 1224 Coils Coil 731 751 - -
Arst2g01096 1224 Gene3D - 594 667 - -
Arst2g01096 1224 Coils Coil 759 779 - -
Arst2g01096 1224 Coils Coil 206 239 - -
Arst2g01096 1224 Coils Coil 683 703 - -
Arst2g01096 1224 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 10 1224 - -
Arst2g01096 1224 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 10 1224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01096 Arst-Chr2 14016861 14028990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01096 9 288 Structural Maintenance of Chromosomes family AT5G15920 25.430 1.79e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01096 K06636 - gmx:100785315 1890.16