Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01088 ATGGAGGGAGGAAAATCATCATCATCGTCGTCGTCATCAATTTCTAATGGCAATAATGTTGAAGTAAGGTATAGAGGGATTCGTAGGAGGCCATGGGGAAAATTTGCGGCGGAAATTCGTGACCCGACAAGAAAAGGGACAAGAATATGGCTTGGAACATTTGAAACTGCTGAAGAAGCTGCAAGGGCTTATGATGCTGCTGCTTTTCATTTCCGTGGCCATAGGGCCATTCTCAATTTCCCAAATGAGTATCAAGCTCCTCTTAACCCTAATTCGTCCTTGCCTTTGCCTCTTCCTGTTCATCCTCCTCCTCCTGCTCCTCATTCGAACACAAATGCATATAATTTGGGTTCGTATTCGAATGAGGGGATAGTGCAGGGTGATCATAGTCATGATCGTGCTTTCGAATTGGAGTATTTGGACAATAAGTTGTTGGAAGAACTACTCCAACAAGCTCAAGATGATGATAGGTATATATACCAGTGCAATGATCATCATACATTTTACAGATAA 513 0.425 MEGGKSSSSSSSSISNGNNVEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFETAEEAARAYDAAAFHFRGHRAILNFPNEYQAPLNPNSSLPLPLPVHPPPPAPHSNTNAYNLGSYSNEGIVQGDHSHDRAFELEYLDNKLLEELLQQAQDDDRYIYQCNDHHTFYR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01088 170 Pfam AP2 domain 23 74 IPR001471 GO:0003700|GO:0006355
Arst2g01088 170 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
Arst2g01088 170 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Arst2g01088 170 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Arst2g01088 170 Gene3D AP2/ERF domain 22 83 IPR036955 GO:0003700|GO:0006355
Arst2g01088 170 ProSiteProfiles AP2/ERF domain profile. 23 81 IPR001471 GO:0003700|GO:0006355
Arst2g01088 170 SMART rav1_2 23 87 IPR001471 GO:0003700|GO:0006355
Arst2g01088 170 PANTHER DNA-BINDING DOMAIN 13 150 IPR044808 GO:0003700|GO:0009873
Arst2g01088 170 FunFam Ethylene-responsive transcription factor 2 22 82 - -
Arst2g01088 170 CDD AP2 23 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01088 Arst-Chr2 13787651 13788459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01088 18 149 AP2-EREBP Transcription Factor Family AT3G23230 50.758 1.58e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst2g01088 AP2 2.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01088 - - aip:107628225 288.115