Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01054 ATGAATACTCCTTTCTTTGAGATCCAAGATTGGAACATGTCCCATGATGTTTTTCCAGACAATTTTTGTTTTGAACCATTCACAAGCAATGATTTTGTTGATGACCCTTTTCATCATTCTCTTTCCTTTGATAGGATTGATGAATCCTACATGGATTCATCAACAACAACAACCATGGAGAACAACAACAACATCATCAAGAACAAGAACAAGAAGAAAGAGAATATTGAAGTTGGTAAGGGAAATGGAGGTTACATAGGAGTTCGGAAAAGGCCATGGGGAAAATTTGCAGCAGAAATTCGAGACACAACGAGGAATGGAAGAAGGGTTTGGCTTGGAACATTCGAAAGTGCTGAAGAAGCTGCTTTGGCTTATGATCAAGCTGCATTTTCCATGAGAGGCTACAACGCTGTTCTCAACTTTCCATTCAAAAGGGTCAAAGATTCTTTGCAAGGAATCATGATGGATTCTGATTCTTGTTCTTGTTCTTCACCTGCACTTGCACTCAAAGAGAGGAATTGCATCCAAAGGAAGTTGTCAAAGACTAACAAGAAAAGGGAATCATCAAAGAAATCATCATCATCATCATCAACAACTAATAATAGTAATGTGATGGTGTTTGAGGATTTGGGGGTTGAATATCTAGAACAACTCCTTAGCATTTCAGATCAAAATTAG 678 0.3791 MNTPFFEIQDWNMSHDVFPDNFCFEPFTSNDFVDDPFHHSLSFDRIDESYMDSSTTTTMENNNNIIKNKNKKKENIEVGKGNGGYIGVRKRPWGKFAAEIRDTTRNGRRVWLGTFESAEEAALAYDQAAFSMRGYNAVLNFPFKRVKDSLQGIMMDSDSCSCSSPALALKERNCIQRKLSKTNKKRESSKKSSSSSSTTNNSNVMVFEDLGVEYLEQLLSISDQN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01054 225 SMART rav1_2 84 148 IPR001471 GO:0003700|GO:0006355
Arst2g01054 225 CDD AP2 85 142 IPR001471 GO:0003700|GO:0006355
Arst2g01054 225 Gene3D AP2/ERF domain 84 144 IPR036955 GO:0003700|GO:0006355
Arst2g01054 225 ProSiteProfiles AP2/ERF domain profile. 84 142 IPR001471 GO:0003700|GO:0006355
Arst2g01054 225 SUPERFAMILY DNA-binding domain 84 143 IPR016177 GO:0003677
Arst2g01054 225 FunFam Ethylene-responsive transcription factor 2 84 144 - -
Arst2g01054 225 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
Arst2g01054 225 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
Arst2g01054 225 PANTHER DNA-BINDING DOMAIN 64 220 IPR044808 GO:0003700|GO:0009873
Arst2g01054 225 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Arst2g01054 225 MobiDBLite consensus disorder prediction 178 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01054 Arst-Chr2 13138355 13139054 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01054 26 223 AP2-EREBP Transcription Factor Family AT3G23240 47.739 2.19e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst2g01054 AP2 6.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01054 K14516 - gmx:100812017 202.216