Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01049 ATGACCAATAATCCTTTGTTCTTCCACAACACAGATTTTTGGGATCAAGATTCATCATACACTGCCTCCTTTGGGTTCCAACCAATGAAGGACAATGATTGTGTTGGTTTTGATGAACCATTTGAAGATTCTTTATCGTTTCACATGGTTGACTTCTCATCATCGTCATCATCAGAATCAAGAACCCTAAAGAAGGAGAAGAAACACGAAGAAGAAGAGGAAGATGGTAAAAGAAGAGGAAGAAGAAGTTACATAGGAGTTCGAAAGAGGCCATGGGGAAAATTCGCAGCAGAAATTCGAGACACAACAAGGAATGGAAGAAGGGTTTGGCTTGGAACATTTGAGAGTGCTGAAGATGCTGCTTTGGCTTATGATCAAGCTGCATTCTCCATGAGAGGCTACTCTGCTCTTCTCAACTTTTCTTTCCAGAAGGTCAAAGATTCTTTGCAAGGAATCATCATGGATTCTGATTCCAACAACAAACACAAACCCTTTTCTTCTTCTTCACCTGCACTTGCACTCAAAGAGAGGAACTCCCTCCAAAGAAAATTGGCATCATGGTCCTCAAAGGCTAATAACAAGAACATCAAGAACAAAAACAAGGATTCATCATCATCATCATCATCATCATCTAAGGAATCTTCATCAACTACTACTACTAATAATAATAATAACAACAATAGTGGTGGTGTCATGGTTTTAGAAGATTTGGGAGTTGAATATCTTGAGTATCTACTAAGCATTTCAGAATCTCATCATCATCATCAAAACACAACAAGCCCTAGCTACTCCATACTACCACAAAAATGA 810 0.3864 MTNNPLFFHNTDFWDQDSSYTASFGFQPMKDNDCVGFDEPFEDSLSFHMVDFSSSSSSESRTLKKEKKHEEEEEDGKRRGRRSYIGVRKRPWGKFAAEIRDTTRNGRRVWLGTFESAEDAALAYDQAAFSMRGYSALLNFSFQKVKDSLQGIIMDSDSNNKHKPFSSSSPALALKERNSLQRKLASWSSKANNKNIKNKNKDSSSSSSSSSKESSSTTTTNNNNNNNSGGVMVLEDLGVEYLEYLLSISESHHHHQNTTSPSYSILPQK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01049 269 Gene3D AP2/ERF domain 82 143 IPR036955 GO:0003700|GO:0006355
Arst2g01049 269 MobiDBLite consensus disorder prediction 58 82 - -
Arst2g01049 269 CDD AP2 84 140 IPR001471 GO:0003700|GO:0006355
Arst2g01049 269 PANTHER DNA-BINDING DOMAIN 60 249 IPR044808 GO:0003700|GO:0009873
Arst2g01049 269 FunFam Ethylene-responsive transcription factor 2 82 142 - -
Arst2g01049 269 MobiDBLite consensus disorder prediction 60 81 - -
Arst2g01049 269 Pfam AP2 domain 84 133 IPR001471 GO:0003700|GO:0006355
Arst2g01049 269 SUPERFAMILY DNA-binding domain 84 142 IPR016177 GO:0003677
Arst2g01049 269 SMART rav1_2 83 147 IPR001471 GO:0003700|GO:0006355
Arst2g01049 269 MobiDBLite consensus disorder prediction 183 231 - -
Arst2g01049 269 ProSiteProfiles AP2/ERF domain profile. 83 141 IPR001471 GO:0003700|GO:0006355
Arst2g01049 269 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
Arst2g01049 269 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01049 Arst-Chr2 13025972 13033077 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01049 78 250 AP2-EREBP Transcription Factor Family AT3G23240 48.555 1.17e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst2g01049 AP2 8.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01049 K14516 - gmx:100782036 168.703