Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01035 ATGAGATCTTCGTTAGAGGCTTCACCATCTTCATCATGCAGATCGAAGAAACACAAGGATCTGAGCTCAAAACTCGTTTCTTCAGATTCGGTTTCGCTCAATACCAAGACACCGGAGAAACCACCGGAGCTGACGCGCCACACGCGCCGCACGCGCAATCGGGGCGTAGCGCTCTCGTTGTCGGAGGTGCGGAGAGTTGCCAAGGGCCTCCAGGAGCAGCGCGGCCGTGAAACGACGTTGTTTGGCGACAAATCTGCGAGGAGGCAGATCGAGCTGCGTTCGCCGAGCAAACCCCAAAAAACCAGTTCCGATGAAGAAGAAGCCTTCAAGCTTCCCGAAAAGTATGAGATTTTGGGCGAGTATTTTGCTAGGTTGGATTGTTCGATTCGACTGCTGCGCATGAAAGGAATGACACCGTCTTTCTCCAAAATCAGCCACAAGATTGAAAGTTTAACTGATAGGAGGTTTACACTTAGTCATTTGGCTCAGTTGAAATTCGTGTTGCCTGAGGCAATTGTGGCTAAGAAGGTGTTAGTGTTTGATGAGAAGACAAGTTGTATGAAGCCAGATCTGCATGTCACTATTAACTATGATGCGGTGGAGTATGCATCAAAGTTGCCAACCGAAGGCGGCCGGGGCATGCTGTTGAGGAAGTTGTTCCGTGCGCGGCTGAGAGATTTTGTTGAATCCCATCCTGGGGGAGATGAAATTCCGGAAGAAGCGCTACCCGAACCATTCAACCCAAAGCAACATCGTCTATCAGACATATTGACAAGGCCTTTCTCATCTAAGGCGACAATATCGGATGCAGATGCAGCTCACCCTTCAACAGTATCATCGGCAGTCATTCCGGATAATGACACTGAAATAGACTTGTTAGAACCTGTTAGGACATCAATTGAATCCCTTAACCAGCAACCATCAGCAGCCTCTCATGTGCCTCAATCTTTCAGAAGACGGTTCTCTCAGAGGTTGAAGGAAAATGGAACAGATAATAATGCACTGGAAAAATTGCCATCAGATTCATTGCAAACTGTGGTTTTACCGGATTCAGAGTCAGGCCTGAGTGATAGACCTACCTCAGAAGGAGCCAGTAATGAAGTATGCCTCACAAATTGTTCTTCATCTGGTGCTCCACTTGCTACTCCATGCAAAACCATTGAACATACAGAAAATAATGGGTCTCAAAAATGCTTTGATGCTGTGTCAACCCCAGCCAAATGTATTTCTACTCCAGCCAGCATAACACCTGCATTGCCTACGCCTCCTAAGAGACAATTCATGAGTCCAGAGGATAACTCTTCCACTACTACTAACAAGTTGGTTAGGCGCCCACCTCCATCGCTAAGGTCGTTGAAATTCGAAACTCCGGTTAAAAATAAGGAGGCAGAGAAAGAGAAATTTGAAACTCCAGTTAAAAATAAGGAGGCAGAGGAAGAATATGATGATCTTTTGGATGTTCTCCCTGAGAGTCTTCTGCAATCGATTAGAGAAAAGGAAATACAAGCAATGGAGGAAAGAGATCCAGCTATTTCACAAGCAAAGAGACGGCGAAAAATGATCGCTGGCCTACCTAAGATCTTTAACATGATTCACCTCTTAAGGCCCTGTTCTATAATAAAAAAAATGATTGACTATTTTCCAGCTTCCCACTCTAAATTTACTTTCTTTATTCTATTATTCTCAGGCGAAGTAGAAGAACAATTGAATTTGTTGCTTGAACTAGCACCAGAATGGATTTCTGAGAAGTTGGCCTCTAGTGGAGATTTCCTTTTCTGCATAAATAAAATGGTGGACGCCGTGACCATACGCGCATCACTTCAAGAAGCAAAATGA 1836 0.4499 MRSSLEASPSSSCRSKKHKDLSSKLVSSDSVSLNTKTPEKPPELTRHTRRTRNRGVALSLSEVRRVAKGLQEQRGRETTLFGDKSARRQIELRSPSKPQKTSSDEEEAFKLPEKYEILGEYFARLDCSIRLLRMKGMTPSFSKISHKIESLTDRRFTLSHLAQLKFVLPEAIVAKKVLVFDEKTSCMKPDLHVTINYDAVEYASKLPTEGGRGMLLRKLFRARLRDFVESHPGGDEIPEEALPEPFNPKQHRLSDILTRPFSSKATISDADAAHPSTVSSAVIPDNDTEIDLLEPVRTSIESLNQQPSAASHVPQSFRRRFSQRLKENGTDNNALEKLPSDSLQTVVLPDSESGLSDRPTSEGASNEVCLTNCSSSGAPLATPCKTIEHTENNGSQKCFDAVSTPAKCISTPASITPALPTPPKRQFMSPEDNSSTTTNKLVRRPPPSLRSLKFETPVKNKEAEKEKFETPVKNKEAEEEYDDLLDVLPESLLQSIREKEIQAMEERDPAISQAKRRRKMIAGLPKIFNMIHLLRPCSIIKKMIDYFPASXHSKFTFFILLFSGEVEEQLNLLLELAPEWISEKLASSGDFLFCINKMVDAVTIRASLQEAK 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01035 612 CDD Cdt1_m 95 247 IPR014939 -
Arst2g01035 612 MobiDBLite consensus disorder prediction 1 106 - -
Arst2g01035 612 MobiDBLite consensus disorder prediction 231 258 - -
Arst2g01035 612 MobiDBLite consensus disorder prediction 25 39 - -
Arst2g01035 612 Pfam DNA replication factor CDT1 like 111 175 IPR014939 -
Arst2g01035 612 SMART CDT1_2 111 244 IPR014939 -
Arst2g01035 612 MobiDBLite consensus disorder prediction 413 452 - -
Arst2g01035 612 MobiDBLite consensus disorder prediction 67 106 - -
Arst2g01035 612 PANTHER DNA REPLICATION FACTOR CDT1 9 612 IPR045173 GO:0003677|GO:0030174|GO:0071163
Arst2g01035 612 SUPERFAMILY "Winged helix" DNA-binding domain 100 246 IPR036390 -
Arst2g01035 612 Pfam DNA replication factor Cdt1 C-terminal domain 491 584 IPR032054 -
Arst2g01035 612 Coils Coil 605 612 - -
Arst2g01035 612 Gene3D - 479 612 IPR038090 -
Arst2g01035 612 MobiDBLite consensus disorder prediction 427 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01035 Arst-Chr2 12782461 12785916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01035 403 610 Core DNA Replication Machinery Family AT2G31270 41.860 5.39e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01035 K10727 - gmx:100778818 442.195