Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00994 ATGGCTTCTAGTAGCTCCGGGTCGCCGTGCGGGGCATGCAAGTTCCTAAGGCGAAAGTGCGCGTCGGATTGCGTATTCGCGCCATACTTCAGCTGGGAAGAAGGGGCGGCAAGATTTGCAGCGATCCACAAAGTGTTTGGTGCAAGCAATGTTTCAAAGATGCTAATGCAGATTCCAAGTCATGAAAGGTGTGAGGCTGTGCTCACAATTGCTTATGAGGCTCAAGCTCGTATTAGAGACCCTGTCTATGGTTGTGTCTCTCATATTTTTGCCTTACAACAACAGGTAGCATGCTTGCAAGCACAACTAATGCAAGTGAAGGCAGAGCTAGCTCATCAAAACATGCAGAATAATCATCATCAGTGGAACAATAATAATATTGGAGTAGGACAAACATTATTATTCAATAATTATAGTAATAATAATCAATTTTGTCCCACTAATAATGATATTAATTACATGCCATCACCCCAAAGTTGTTCACTTGATGAGTCAATTGATCAAAGTAGCATTATTAGTGATGGAATAATGAGCATGCTGAGCACTGTGGAGGATTTCTCATTCCAAGCTTGTTCCAAGAGAAGATCATCATCTTATAATGACACTGATTTGGGTGAGCTGCAAGAATTGGCACTTAGGATGATGAGGAATTATAACTAG 660 0.4136 MASSSSGSPCGACKFLRRKCASDCVFAPYFSWEEGAARFAAIHKVFGASNVSKMLMQIPSHERCEAVLTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAELAHQNMQNNHHQWNNNNIGVGQTLLFNNYSNNNQFCPTNNDINYMPSPQSCSLDESIDQSSIISDGIMSMLSTVEDFSFQACSKRRSSSYNDTDLGELQELALRMMRNYN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00994 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 177 - -
Arst2g00994 219 Pfam Lateral organ boundaries (LOB) domain 9 107 IPR004883 -
Arst2g00994 219 Coils Coil 89 116 - -
Arst2g00994 219 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00994 Arst-Chr2 12371310 12373253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00994 3 217 AS2 family AT2G42430 51.626 2.21e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst2g00994 LOB 4.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00994 K13944 - cpap:110815110 250.366