Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00990 ATGAATTCTAGAAGAGACGCCCGGAACAGCAGAGTTGCTCTGTTTGACGGCATTGAGGAGGGAGGCATCCGAGCATCATCACTTTACTCCTCCTATAATGAAATTGATGAACAAGATAACGAGCGAGCAATGGGTGGATTGCAAGATAGAGTCAGTTTGTTGAAAAGAATCTCAAGTGATATACACGAGGAGGTGGATAGTCATAACCGGATGCTGGACCGCATGGGGAATGACATGGATTCTTCAAGAGGAGTTCTTTCAGGGACTATGGACAAATTCAAAATGGTCTTTGAGAAAAAATCCAGCCGAAGAACGTTTTCACTTATAGCATCCTTTGTTGTGCTTTTCCTTATAATATACTATTTGACTAGGTAA 375 0.4187 MNSRRDARNSRVALFDGIEEGGIRASSLYSSYNEIDEQDNERAMGGLQDRVSLLKRISSDIHEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFEKKSSRRTFSLIASFVVLFLIIYYLTR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00990 124 PANTHER GOLGI SNARE BET1-RELATED 8 123 - -
Arst2g00990 124 SMART tSNARE_6 29 96 IPR000727 -
Arst2g00990 124 Gene3D - 42 105 - -
Arst2g00990 124 SUPERFAMILY SNARE fusion complex 30 96 - -
Arst2g00990 124 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 34 96 IPR000727 -
Arst2g00990 124 CDD SNARE_Bet1 37 94 IPR039899 -
Arst2g00990 124 FunFam bet1-like SNARE 1-1 41 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00990 Arst-Chr2 12233844 12236561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00990 35 123 SNARE and Associated Proteins AT1G28490 28.090 5.68e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00990 K08504 - gmx:100500028 209.534