Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00988 ATGGAAGGGAAGAACTATTATATGAAGAACAAGAACACTAGTAGTAGTACTACTCATATTAACAATAGCTTTGAGGAGCATTATTCATGGGAAACTTCTTCATCAACACGGCCAACAAGAAGCTATGCTTGTAGCTTTTGCAAGAGAGAGTTCAAATCTGCTCAAGCTTTGGGTGGACACATGAATGTTCATAGAAGGGACAGGGCAAGATTGAGATCTTCATGGATTTCTAATCACACTCCTAAACCTAATCTTAACCCCAACCCTAACCCTAATCCTACAACGACTCTTGTTTCTTCATCATCATCTCCTTTATCTAATGATCCTATCAATAATTGTTCACATATTTCTCCAATTTATAGCCCTAATTGTTGTCTCAATTTATCTTCTTCTTCTTCTTCACCCTCCCCTAATTTAGCTTCCATCACAAGAAGTGAAGATAAAAAACCTAGACTCATCATATCTACTCCACAAGTTCTTCCTCTTGTGATGAATAGTCCTCAAAACATGGTGATGATGATGAGTAAGAAAAGCAAAAGTGGTGATTTTGTTGGTGGGGTTGATGATGATGAGAATTACAAGGATAATGTTTTCAAGCACAAGAATGAGCATAACAACATTACCTTGGAGTTGGGAATAGGATTGGTTAAGCACAAAGAGCAGAAGTTGGATTTGGAGCTTAGACTCTAG 690 0.3754 MEGKNYYMKNKNTSSSTTHINNSFEEHYSWETSSSTRPTRSYACSFCKREFKSAQALGGHMNVHRRDRARLRSSWISNHTPKPNLNPNPNPNPTTTLVSSSSSPLSNDPINNCSHISPIYSPNCCLNLSSSSSSPSPNLASITRSEDKKPRLIISTPQVLPLVMNSPQNMVMMMSKKSKSGDFVGGVDDDENYKDNVFKHKNEHNNITLELGIGLVKHKEQKLDLELRL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00988 229 PANTHER OS07G0101800 PROTEIN 20 229 - -
Arst2g00988 229 MobiDBLite consensus disorder prediction 76 105 - -
Arst2g00988 229 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Arst2g00988 229 MobiDBLite consensus disorder prediction 91 105 - -
Arst2g00988 229 SUPERFAMILY beta-beta-alpha zinc fingers 39 68 IPR036236 -
Arst2g00988 229 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
Arst2g00988 229 Gene3D Classic Zinc Finger 12 84 - -
Arst2g00988 229 SMART c2h2final6 42 64 IPR013087 -
Arst2g00988 229 Pfam C2H2-type zinc finger 42 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00988 Arst-Chr2 12071993 12072682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00988 5 229 C2H2 Transcription Factor Family AT3G23130 32.174 2.25e-21 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst2g00988 zf-C2H2_6 6.6e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00988 - - adu:127744900 376.326