Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00945 ATGCAGGAAACATCACTGGACATTGGGATGGACGAGGCGGCGTTTGGAACAGAATATTTAGATGGTGATGGTGACCTGGGCAGTGATGTACGTGGCAGCGGTTTAACAAGGCCGGAGGAGGTGATGGAGATGTTGTTTAACTCTCCCGATGAGGCTGCCCGTTTCTACGAACAGTATAGCCGAGGCAAGGGTTTTGCTATGCGTGTTGGTAAGAAGTTAAGAAATAAGAATGGGGACATCGTGCGATACACATATTTGTGCAACAGAGAAGGGTTTAGGCAAAAGAAGTGGTTGGAGTTGGAAGGAAGAAAGAGAGAGCACAAGGTGGTTACGCGATGTGGGTGCATGGCAGAGATGCGTATCAAGCAAAATGATCAGATGGGTAAATGGTATGTGTCGAGATTTATAGATGACCACAATCACGAGCTCCTCCCTCCGAAGTTGGTGGAATACTTGCCTCCACATAGGAAGATGTCGGATGTGGACGTAGCCCACATGGATAGCTTACGGCAAGTTGGGATTTCGGTTCCTAAAATATATGAGTCGCTTGCAGCACAGGCTGGTGGCTTTGATCATATCCCATTCACAAAGAGAGATATGTACAATGAAGTGAGGCGGCAACGAGGCATGAGGAAGGGAGATGTGAATGCAACGATAAGGTATTTTGAGGCAGGTGCAAAGGCGGACGAGAAACTCTTTTGGAGGTGTCAGGTGAGTGCAGATCAGCATATGTGTGACCTGTTTTGGTGTGACGGGAGGAGTCAGGATGATTATAAAATTTTTGGTGATGTCCTTGCGTTTGATGCAACGTACGGGCGCAACAAATACAACCTACCGGTCATTATTTTTTCCGGGGTGAACCATCACAACCAGACGTGCGTCTTTGGGGCTGCCATGGTCTCTTGTGAAACCCAAGCAACTTATGTTTGGGTTTTGCAGAAGTTCTTGGAATGCATGGAGGGGAAAGCACCCAAGGCAGTAATAACAGACGGAGATCGTTCTATGCGAATGGCAATTAATGAAGTTTTTCCGGAGGCTCACCACAGGCTTTGTGCATGGCATCTACTAAAAAATGCCACAACAAATGTGTGCTTGCCGCGGTTTACAACGTTATTTAGATATTGTATGCTTGCTGATATTGAGATAGAAGAGTTTGAACAGCATTGGGAGGCAATGTTGGATGAGTGTGGAGTCCGAGATGTAGAGTGGGTTCAGGATACATACAGGAAGAAATTATATTGGGCAACTGCATACATACGCGGTAGGTTCTTTGCCGGCATTAGGACGACATCGCGATGTGAATCGCTGCATGCGAAGCTAGGCAGGTTTGTGGAGAGGAGGTATGGGATACTCGACTTTGTGACGAACTTTCAGCGTTGTGTTGAGTTCCTCAGAGATAACGAGGATGAGATGGACTTTCGGTCCTCGTATGGGACCCCCGTACTGCAGACTCAGTTTCCGGAACTTGAGAAATCCGGAGCAATGAAGTATACCCGTGAGATATTTTCAAGGTTCCGTGAATCCTTGAAAAGGTGTGTTCGGATAACCGTTGTGGAGAGCCAGCCGTGTGAGGGCGGTACTATTTATGTGACACAGAAGTATTTGCGACCGGGAAGAAAGTGGAATGTTATGCATGTGTTGGCGTCGGATAAATATACATGCAGTTGCCAAAGAATGGAATCGTTTGGGCTACCTTGTGTGCATATACTCTCAGTTTTGGTTCGGTTAGACGTGGGTTCTCTTGCAGACACCTTGGTCTTGGAGAGGTGGACTAAGTCAGCCAAGTTCGGTTTGTATGATGATGTTGCTGGGGACAAAATAGTTGATATTGCTGCCCTGTACAGGATGCGGATGGGAACATTTTTGCAGCACTGCAAGCGTTTGGCTCGACTTGTGTGTAACAACGAGGACTTATTCAAGTTGTATACAGAGCAGATAGTTCAGGAAGCAAATAATCTTGAAAGTATGAATGATTCGGGGAATAGTGTCGGCGTTGGTGGTGGCGGCAACAATGGTAGAGTACTAGATCCGATTGGGGTTCGTACCAAGGGCACCGGGCGTGGTAATGTACAGGCTGGGGCAAGGGGAGTGAAGCGTAGAAAGTGTAGCACGTGTGGGGTAGTCGGACATCGTCGAACTCGATGCCCAAATCGGGCGAACATGTCGGTGCCAAATAGCCAGAATGAGGTGCCGCAAATGGTGTCACAGTCTGCGGTGCCTGGTGATTTTCCTCCTGTCGAGAATATAGGGGTGCAGGATTGCTATCGTCCATCAGCTACATAG 2283 0.477 MQETSLDIGMDEAAFGTEYLDGDGDLGSDVRGSGLTRPEEVMEMLFNSPDEAARFYEQYSRGKGFAMRVGKKLRNKNGDIVRYTYLCNREGFRQKKWLELEGRKREHKVVTRCGCMAEMRIKQNDQMGKWYVSRFIDDHNHELLPPKLVEYLPPHRKMSDVDVAHMDSLRQVGISVPKIYESLAAQAGGFDHIPFTKRDMYNEVRRQRGMRKGDVNATIRYFEAGAKADEKLFWRCQVSADQHMCDLFWCDGRSQDDYKIFGDVLAFDATYGRNKYNLPVIIFSGVNHHNQTCVFGAAMVSCETQATYVWVLQKFLECMEGKAPKAVITDGDRSMRMAINEVFPEAHHRLCAWHLLKNATTNVCLPRFTTLFRYCMLADIEIEEFEQHWEAMLDECGVRDVEWVQDTYRKKLYWATAYIRGRFFAGIRTTSRCESLHAKLGRFVERRYGILDFVTNFQRCVEFLRDNEDEMDFRSSYGTPVLQTQFPELEKSGAMKYTREIFSRFRESLKRCVRITVVESQPCEGGTIYVTQKYLRPGRKWNVMHVLASDKYTCSCQRMESFGLPCVHILSVLVRLDVGSLADTLVLERWTKSAKFGLYDDVAGDKIVDIAALYRMRMGTFLQHCKRLARLVCNNEDLFKLYTEQIVQEANNLESMNDSGNSVGVGGGGNNGRVLDPIGVRTKGTGRGNVQAGARGVKRRKCSTCGVVGHRRTRCPNRANMSVPNSQNEVPQMVSQSAVPGDFPPVENIGVQDCYRPSAT 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00945 760 Pfam SWIM zinc finger 551 573 IPR007527 GO:0008270
Arst2g00945 760 Pfam Zinc knuckle 699 728 IPR041670 -
Arst2g00945 760 Pfam FAR1 DNA-binding domain 54 145 IPR004330 -
Arst2g00945 760 ProSiteProfiles Zinc finger SWIM-type profile. 544 577 IPR007527 GO:0008270
Arst2g00945 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 652 IPR031052 GO:0006355
Arst2g00945 760 SUPERFAMILY Retrovirus zinc finger-like domains 683 720 IPR036875 GO:0003676|GO:0008270
Arst2g00945 760 SMART 26again6 552 579 IPR006564 GO:0008270
Arst2g00945 760 Pfam MULE transposase domain 264 358 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00945 Arst-Chr2 11305651 11308007 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst2g00945 MULE 6e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00945 - - aip:107620408 917.146