Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00932 ATGAGGAAGCTCATTGAAGAAGAAGCCACTAAAGCTAAGAAAACCAAGGAGCCCAAACCTAAGAAGGCTTCCAAGCCTAGAAGCCCACCGACTCACCCTCCTTACCAAGAGATGATCAAGGACGCTATTGTTACGTTGAAGGAGAAAAACGGTTCGAGCCAATACGCGATTCAGAAGTTTCTCGAAGAAAAGCATAAGCAGTTTCCAACGAACTTCAGAAAGCTTCTTTTGTTCAATTTGAAGAAGCTCGTAGCTTCTGGAAAGCTCGTTAAGGTTAAAGGTTCCTTCAAGCTTCCGGCATCAAAGGCGCCAGCATCATCAGCGCCTTCGCAGGCAAAGAAGCCCGCGGCTACTAAGACTAAGACCAAGTCCAAGCCTAAGCCTAAGCCTAAGCCTAAGCCCGCTGTCAAGGTGAAGGCAACAAAAGCAAAGACAACCAAGACTAAATCGGTGAAATCAGTTTCAGCTAAGTCTAAGCCCAAGCCCGCTCCAAAGCCCAAGGCTGTGGCGAAGCCTAAAGCAGCTGCAGCAGCGAAGCCCAAGGCTGCTGCAGCTAAGACCAAAGCAAAGCCCAAGGCAGCTGCTAAGCCACCGGCAAAAGTGTCGAGGATGTCGACTAGGGCTTCGCCAGGAAAGAAGGCTGCACCTGCCGCAAAGCCTGCAGCAAAGAAGGTTGCGGCAGCGAAGAAGAGCGTGAAGCCCAAGAGCGTAAGGTCTCCGGCGAAGAGGGCTTCGGTGAAGAGGGGCGGAAGGAAGTGA 759 0.5138 MRKLIEEEATKAKKTKEPKPKKASKPRSPPTHPPYQEMIKDAIVTLKEKNGSSQYAIQKFLEEKHKQFPTNFRKLLLFNLKKLVASGKLVKVKGSFKLPASKAPASSAPSQAKKPAATKTKTKSKPKPKPKPKPAVKVKATKAKTTKTKSVKSVSAKSKPKPAPKPKAVAKPKAAAAAKPKAAAAKTKAKPKAAAKPPAKVSRMSTRASPGKKAAPAAKPAAKKVAAAKKSVKPKSVRSPAKRASVKRGGRK 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00932 252 Gene3D - 26 114 IPR036388 -
Arst2g00932 252 FunFam Histone H1 26 112 - -
Arst2g00932 252 MobiDBLite consensus disorder prediction 226 252 - -
Arst2g00932 252 MobiDBLite consensus disorder prediction 1 15 - -
Arst2g00932 252 CDD H15 29 108 IPR005818 GO:0000786|GO:0003677|GO:0006334
Arst2g00932 252 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 31 100 IPR005818 GO:0000786|GO:0003677|GO:0006334
Arst2g00932 252 SMART h15plus2 29 95 IPR005818 GO:0000786|GO:0003677|GO:0006334
Arst2g00932 252 PRINTS Histone H5 signature 177 196 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Arst2g00932 252 PRINTS Histone H5 signature 45 62 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Arst2g00932 252 PRINTS Histone H5 signature 121 135 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Arst2g00932 252 PRINTS Histone H5 signature 18 39 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Arst2g00932 252 PRINTS Histone H5 signature 155 172 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Arst2g00932 252 MobiDBLite consensus disorder prediction 98 252 - -
Arst2g00932 252 PANTHER HISTONE H1 11 226 - -
Arst2g00932 252 MobiDBLite consensus disorder prediction 1 38 - -
Arst2g00932 252 Pfam linker histone H1 and H5 family 32 98 IPR005818 GO:0000786|GO:0003677|GO:0006334
Arst2g00932 252 SUPERFAMILY "Winged helix" DNA-binding domain 26 104 IPR036390 -
Arst2g00932 252 MobiDBLite consensus disorder prediction 118 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00932 Arst-Chr2 10995712 11013429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00932 38 129 Single Myb Histone (SMH) Gene Family AT1G49950 38.043 6.40e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00932 K11275 - cpap:110814810 128.642