Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00910 ATGGAGAAGATGGTGTTTGAGGAAACTGAGCTCAGGCTTGGGCTGCCAGGGAACAACAAGAAGAAGAACAATGAAAAGAAGAGAGGGTTCTCTGAGACCGAATCTGAAACTGAGAGTGATGAGAACAATAACAGTGATGAAACTTCCAACACTACCGTGGATTTGTTGCTGAATCTCTCGTCACCAAAGAAGGAAGCAAATAAGAATAACAACAATGGTGTTGTTGCTGAGAATCACTCATCTCCTAATAGTAATAAGGAGAAGAATCTTCTTCCTTCTGATCCTGCCAAGCCTCCTGCTAAGGCTCAAGTGGTGGGATGGCCACCAGTGAGGTCATACAGGAAGAACATGTTTGCAGTTCAAAAAAGCAGCACAGAAGAGAGTCAGAAGAATGAGAAGAATAACAATAATGGAAATGGTAATGGAAGCTTTGTGAAGGTAAGCATGGATGGTGCACCCTACCTTCGCAAAGTGGACTTGAAGAACTACAATAGTTACCCTCAGCTCTCTGATGCCTTAGGCAAAATGTTTAGCTCTTTCACTATTGGAAGTTGTGAATCAGAAGGAATGAAGGATTTCTTCATGAATGAGAGAGCTTTGATGGATTTATTGAACAATTCTGATTATGTCCCAACTTATGAAGATAAGGATGGAGATTGGATGCTTGTCGGTGATGTTCCTTGGGAGATGTTTGTGGAATCATGCAAGCGTTTACGTATCATGAAAGGAAAAGAAGCAATTGGACTGGCACCTAGAGCCATGGAGAAATGCAAGAACAGAAGCTAG 786 0.4198 MEKMVFEETELRLGLPGNNKKKNNEKKRGFSETESETESDENNNSDETSNTTVDLLLNLSSPKKEANKNNNNGVVAENHSSPNSNKEKNLLPSDPAKPPAKAQVVGWPPVRSYRKNMFAVQKSSTEESQKNEKNNNNGNGNGSFVKVSMDGAPYLRKVDLKNYNSYPQLSDALGKMFSSFTIGSCESEGMKDFFMNERALMDLLNNSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00910 261 ProSiteProfiles PB1 domain profile. 142 243 IPR000270 GO:0005515
Arst2g00910 261 MobiDBLite consensus disorder prediction 19 35 - -
Arst2g00910 261 FunFam Auxin-responsive protein 115 253 - -
Arst2g00910 261 Pfam AUX/IAA family 8 252 IPR033389 -
Arst2g00910 261 MobiDBLite consensus disorder prediction 119 143 - -
Arst2g00910 261 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 248 IPR003311 GO:0005634|GO:0006355
Arst2g00910 261 MobiDBLite consensus disorder prediction 44 90 - -
Arst2g00910 261 SUPERFAMILY CAD & PB1 domains 134 242 - -
Arst2g00910 261 Gene3D - 136 255 - -
Arst2g00910 261 MobiDBLite consensus disorder prediction 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00910 Arst-Chr2 10681853 10687663 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00910 113 241 B3 DNA Binding Superfamily AT5G37020 28.682 2.07e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Arst2g00910 AUX_IAA 2.2e-89 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00910 K14484 - gmx:100803065 293.893