Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00908 ATGGAGAATTGTAGCTATGAGAAAGTAGGTTTGAACCTTGAGGCAACAGAGTTGAGGTTGGGTTTGCCAGGCAGTGCTGATGAACATGATGAGAAACTCTCATCATGTAGTTACTCCTCATCATCATCATCAAGTGTTGTTATTAGAAGCAAGAAGAGATCTTCACCTGAAGAATCCATTGATGATGAGGAAGAGCTCAAAAGCAACAAGAGAACCATGATTTCTCATCATAATGATGACCAAGACAAAAATGTCCCACCCTCAAAAGCACAAGTAGTAGTGGGGTGGCCACCAATTAGATCTTACAGGAAGAACAATGGTGTACAACAACAACAACAAGAACAAAAGAAGAAGGGAGAAGAGGTGTATGTGAAAGTGAGCATGGCAGGTGCACCTTACTTGAGGAAGATTGATCTCAATTTTTACAATACCTACCAACAATTACTCTTGGCTTTGGAAAATATGTTCAACTGCACTTTTGGTGAATATTCAGAAAGAGAAGGCTACAATGGATCTGAATTTGCTCCAACTTATGAAGACAAAGATGGTGATTGGATGTTGGTTGGAGATGTGCCATGGAACATGTTCATTTCTTCCTGCAAGAGGCTAAGGATTGTGAAAGGATCAGAAGCTAAGGGATTGGGTTGTTTATGA 654 0.4021 MENCSYEKVGLNLEATELRLGLPGSADEHDEKLSSCSYSSSSSSSVVIRSKKRSSPEESIDDEEELKSNKRTMISHHNDDQDKNVPPSKAQVVVGWPPIRSYRKNNGVQQQQQEQKKKGEEVYVKVSMAGAPYLRKIDLNFYNTYQQLLLALENMFNCTFGEYSEREGYNGSEFAPTYEDKDGDWMLVGDVPWNMFISSCKRLRIVKGSEAKGLGCL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00908 217 MobiDBLite consensus disorder prediction 35 50 - -
Arst2g00908 217 MobiDBLite consensus disorder prediction 51 67 - -
Arst2g00908 217 MobiDBLite consensus disorder prediction 24 67 - -
Arst2g00908 217 ProSiteProfiles PB1 domain profile. 121 213 IPR000270 GO:0005515
Arst2g00908 217 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 212 IPR003311 GO:0005634|GO:0006355
Arst2g00908 217 Gene3D - 115 217 - -
Arst2g00908 217 SUPERFAMILY CAD & PB1 domains 119 205 - -
Arst2g00908 217 FunFam Auxin-responsive protein 116 217 - -
Arst2g00908 217 Pfam AUX/IAA family 15 215 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00908 Arst-Chr2 10643075 10644470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00908 105 214 B3 DNA Binding Superfamily AT2G46530 33.636 7.61e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Arst2g00908 AUX_IAA 5.2e-61 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00908 K14484 - gmx:100792134 249.595