Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00906 ATGGCCAATCGCCATCCTTCCGAGGCTCCCGCCGCCGACGACTTCCTCGAGCAAATCCTCGGCCTCCCGAACTTCGCCTCCGCCGACTCTACCCTCGCCGGAGGAACCGGCGCCTCCTCTCTCGCCGCCGCCGCCGCAGCTGCAGCTGCTGCTTCTCCAGCGGCGCCGATGATGCTTCAGCTAAGCTCTGACGACGCCTCCGCCGCGTACCTCGTCGGAGCCACCGCAGGTGGTGGTTTCCACCCGCCTCCGGTGTACGAGCTTGGGCTGAGCCTGGAGCAAGGGAATGGAGGAGGGTTCTTGAAGCCTGAGGATGCTTCTGGAAGTGGAAAACGGTTTCGTGACGACGTTGTTGATGGAAGAGCTAAGAATGTTTTCCATGGGCAGCCCATGCCTACAACTGTTCCCGCTGCTCCACATCCACCAGGAATGCGCCCTCGGGTGCGGGCTCGTAGAGGTCAGGCTACAGATCCACACAGCATAGCTGAAAGGCTGCGCAGAGAAAGAATAGCTGAAAGGATCAGGGCCTTGCAAGAACTGGTTCCCAGTGTTAACAAGACAGATAGAGCTGCTATGCTGGATGAAATTGTGGATTACGTCAAGTTCTTAAGGCTTCAAGTGAAGGTCTTGAGCATGAGTAGGCTGGGCGGTGCCGGTGCAGTGGCTCCATTAGTAACCGACATCCCATTATCATCAGTCGAGGAAGAAGGCGGCGAGGGAAGAAACCAACCAGCTTGGGAGAAGTGGTCAAATGATGGCACAGAAAGGCAAGTAGCTAAGCTAATGGAAGAAAATGTCGGCACTGCCATGCAGTTCCTTCAATCAAAAGCACTCTGCATCATGCCAATCTCACTAGCTTCAGCAATATACCAGTCACAACCACCAGACACCTCTAGCATAGTAAAGCCAGAAACTAACCCTCCTTCATAG 930 0.5548 MANRHPSEAPAADDFLEQILGLPNFASADSTLAGGTGASSLAAAAAAAAAASPAAPMMLQLSSDDASAAYLVGATAGGGFHPPPVYELGLSLEQGNGGGFLKPEDASGSGKRFRDDVVDGRAKNVFHGQPMPTTVPAAPHPPGMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGRNQPAWEKWSNDGTERQVAKLMEENVGTAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKPETNPPS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00906 309 SMART finulus 160 209 IPR011598 GO:0046983
Arst2g00906 309 FunFam Basic helix-loop-helix transcription factor 149 211 - -
Arst2g00906 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 213 IPR036638 GO:0046983
Arst2g00906 309 Pfam Helix-loop-helix DNA-binding domain 159 203 IPR011598 GO:0046983
Arst2g00906 309 MobiDBLite consensus disorder prediction 124 158 - -
Arst2g00906 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 203 IPR011598 GO:0046983
Arst2g00906 309 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 64 288 - -
Arst2g00906 309 Gene3D - 149 211 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00906 Arst-Chr2 10623498 10628073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00906 85 308 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 81.385 1.43e-119 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst2g00906 HLH 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00906 - - gmx:100797789 447.203