Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00889 ATGACTGCAAAAACAGACTTGATCAGAGACATCAATTCAACCAAGCTGGCTTGGTCGTTGGTCGTGGGTGTTGCCCGATTGTATGAGTTTTCCAGCCAGTGGAACCAGAATGAAGTGTTTAGCTTGGAGATGGTCTTGCAAGATGAGCAGGGTGATAGAATTCATGCAACGATATGTAAGCCTGGCTTGGACTTATTCAGGGAAAGGATAAAAGAGCATGCCGTGTATAGTATGTGGAATTTTATTGTGAAAATTAACAATGAGAAGGTAAGGACAACTGCTCATAAGTACAAGCTTAGCTTCTATACAAAGACAGAGGTGGAAGTCCTTCCAATCGAGACTTTCGCTTTTAACCCATTCAAATTCTGCCCCTTTGCTGAACTTGAGTCAAATGCTCCAATGGATGGCAATTTTTTGTTTGATTACATAGGAGAGGTTGTTGGAAAAGAAGAAGCTATGGGGATAATTACACGCACGGGTAAAGAAAGCAAGCGTATTGCACTACTGTTGGAAGATCTAGAGAAGCACAAGATTAAATGTACATTGTTCGGAGAATTGGTGGCCCAAGTGCTTCCACACCTCGAGCGAGATGATGGGGAGCCTTTCATAATGGTTGTTCAGCTTTTTAAGTCGAATGTATACTTAAATTCTGTGAATGTTCAAAGCACTTACTATGTCTCCAAATGTTACTTCAATCCAAACCTTCCCGAAGTTATTGACTTCAAGAAAAGATTGGCAGAGGAGGAAACCTCTTGCTGGATTGTGGGAAATATTGTGTCTTTAGAGGTCGATAAATATGACTGGTCCTATACGTCATGTAAGACATGTCCAAAGAAAATTCTAGAGAGCAAAGATAGGTACTGGTGTGATCATTGTAGGCGTGTAGGCTTCAAGGCTATGCTAAGGTATAGACTTCAAGTAATCGTCACTGATGAAAGCGGGGTATATAGCATTTTAAAGATTTCAGATGATGAGTACCTCATGTCCATTTTTGGTCCTGCCAATTCTTCTTTCAATGCTTCTGTAAGAGATAATAGCAATGGACATGAGACAGTTTCTCTGTCCAAGGATTCAGCAGTTGAGAGCAACTATGATAGCTCCTATGAGACTCCAGCCAAGAGGTCCTCTCCTGATATAGGTGATGGCTCGACAACAGAAGCAGATCTAGCTTTGAGTGATGAAGAATTAAGGAATCTAACGTTGATTGAGATCGAGCAAATCTTGAACAAAAAGCAACACACTGAGTGCCTCTCCAAATTAACTGCAGAGCAAAAAAAGGTTTATGATAAGATCATCAACGCTGCAGAAAGTCAACATGGACGTGTCGGCAATGGAACATCTGAAGGAACATGTGATGGAAGCAACATGATTAACATACCTCCTGAATTGCTTATCACTAATTATAATGATCCTATACAGGCAATGATTGAAGTAATCTATTCCGATTACATTATTGACATGGCTAACGAAAGCCACTTGAAAGATCGAGCTATTTTAGCTCCTACAATTCATGTTGTAGATGAGGTAAATGATTACATGACTGCAATGAATAACAATTAA 1560 0.4006 MTAKTDLIRDINSTKLAWSLVVGVARLYEFSSQWNQNEVFSLEMVLQDEQGDRIHATICKPGLDLFRERIKEHAVYSMWNFIVKINNEKVRTTAHKYKLSFYTKTEVEVLPIETFAFNPFKFCPFAELESNAPMDGNFLFDYIGEVVGKEEAMGIITRTGKESKRIALLLEDLEKHKIKCTLFGELVAQVLPHLERDDGEPFIMVVQLFKSNVYLNSVNVQSTYYVSKCYFNPNLPEVIDFKKRLAEEETSCWIVGNIVSLEVDKYDWSYTSCKTCPKKILESKDRYWCDHCRRVGFKAMLRYRLQVIVTDESGVYSILKISDDEYLMSIFGPANSSFNASVRDNSNGHETVSLSKDSAVESNYDSSYETPAKRSSPDIGDGSTTEADLALSDEELRNLTLIEIEQILNKKQHTECLSKLTAEQKKVYDKIINAAESQHGRVGNGTSEGTCDGSNMINIPPELLITNYNDPIQAMIEVIYSDYIIDMANESHLKDRAILAPTIHVVDEVNDYMTAMNNN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00889 519 Pfam Replication factor-A C terminal domain 264 315 IPR013955 -
Arst2g00889 519 MobiDBLite consensus disorder prediction 349 385 - -
Arst2g00889 519 CDD RPA1_DBD_A_like 19 107 - -
Arst2g00889 519 Gene3D - 116 254 IPR012340 -
Arst2g00889 519 Pfam PIF1-like helicase 441 514 IPR010285 GO:0000723|GO:0003678|GO:0006281
Arst2g00889 519 SUPERFAMILY Nucleic acid-binding proteins 120 248 IPR012340 -
Arst2g00889 519 SUPERFAMILY Nucleic acid-binding proteins 235 321 IPR012340 -
Arst2g00889 519 MobiDBLite consensus disorder prediction 349 382 - -
Arst2g00889 519 Pfam Domain of unknown function DUF223 43 108 IPR003871 -
Arst2g00889 519 SUPERFAMILY Nucleic acid-binding proteins 7 111 IPR012340 -
Arst2g00889 519 Gene3D - 4 109 IPR012340 -
Arst2g00889 519 CDD RPA1_DBD_B_like 141 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00889 Arst-Chr2 10236878 10242707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00889 1 314 Core DNA Replication Machinery Family AT5G08020 26.216 2.29e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00889 - - adu:107473519 1046.96