Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00868 ATGGAGAAGTATGAGATTCTTCAACAGATTGGCAAAGGTTCCTTTGGTTCTGCTCTTCTTGTTAGGCACAGACATGAAAACAGAAAGTATGTACTCAAGAAGATCAAACTTGCTCGCCAAACTGACAGAACTCGTAGATCTGCTCATCAAGAGATGGAACTCGTCTCTAAAGTTCGAAATCCATTTATCGTGGAATATAAAGATTCCTGGGTAGAAAAGGGTTGTTTTGTATGTATCATCATCGGCTATTGTGAAGGCGGAGATATGGCTGAAGCTATAAAAAAGTCTAATGGTATTCATTTTTCTGAAGAGAAGCTTTGTAAGTGGCTTGTTCAACTGCTGATGGCACTTGATTACTTGCATGCAAATCATATTCTGCACCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAGATATACGTCTAGGTGACTTTGGTCTTGCTAAAATGTTGACATGTGATGATCTTGCTTCCTCGGTTGTCGGGACTCCAAGTTATATGTGTCCAGAGCTTCTTGCTGATATACCTTATGGCTCTAAGTCAGATATCTGGTCTTTAGGATGCTGTGTTTATGAAATGGCTGCACATAAGCCAGCTTTCAAAGCTCTTGATATGCAAACATTGATTAATAAAATAAACAAGTCTTTAGTGGCTCCACTACCAACCTTGTATTCCAGTCCATTTCGAGGGCTTGTCAAGAGTATGCTGCGGAAAAATCCAGAGCTTAGGCCAAGTGCTGCAGAGTTATTAAATCATCCACATCTTCAGCCTTATATTCATAAAATTCACCTGAAACTCAATACCCCAAGAAGAAGTACTTTTCCCTTCCAGTGGCATGATTCGAGTTACTTAAGGAGAAACCGCTTTTTCGAGCCAGAATCTGTTTCTACTATTTCAGACAGATACAAAAGATTATCCTTTAGCAATGACAGAGCTTTGAATCCTAGTATTTCTGGAACTGAAGTAGGTTCTCTCTGTTCTGCTCAAAGAGCACAAGGATCCTTCACTTATTCAAAAGAGAGATTGTATGATCTTTCTGTTGGTTGTGTCCGGGAAGAGTTGAATGCTAACAAGTCGAAAGCAGCAAAGTTCTCTGCTTTCGACAGGACACCAAGATCGCAAGCAGGGAAGGTTTCCACCCCGAGACGGCCGATAATACCGTCGATAGCACATACTAGCTCCAAGCGTGATTCACTTCCAGCATCTCCGGCCGCAAAGTTCGCCCCACCAACTCGTCGAGCATCTCTTCCACTTCTTACACCTTCAACTGGAGTCATGGCAACAGCTACCCCTTACAGAGCTAGCGTTGGCCTTCTAAGAAGCCTGGACTCACCAGATATTTCTGTCAATGCACCACGAATCGACAAGATGGCAGAGTTCCCTCTAGCATCCTGCGAGGGCAATCATTTCTTCCCCGTTCGTGGCACCTCATCAACGTCGGCTCATTGCTCGTCTAGCTCCCCCGGTAGCGCCGAATGCTCATTCACAAAAGACAAGTGTACAGTCCAAGTTGTGGACAAGGCCAGTGTCCCTACTATTACCACTGGTGTTAATAGCACTCCAGCTCCGGTCTCTCACGGCAGTGAATGCTCTGAGCCCGGGGCAACCATTGTTTCAAGCCATTCCTCGGCTGACTCTCGTCAGCGCAGGTTCGACACCTCGTCGTACCAGCAGCGCGCGGAGGCGTTGGAAGGGTTGCTGGAGTTCAGTGCAAGGCTCCTACAGCAACAGAGGTTTGAAGAGCTTGGTGTGTTGTTGAAACCATTTGGACCTGAGAAGGTTTCACCAAGGGAAACAGCTATTTGGTTGACTAAGAGCTTCAAAGAAACTGCGGCATAA 1848 0.4486 MEKYEILQQIGKGSFGSALLVRHRHENRKYVLKKIKLARQTDRTRRSAHQEMELVSKVRNPFIVEYKDSWVEKGCFVCIIIGYCEGGDMAEAIKKSNGIHFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTCDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAHKPAFKALDMQTLINKINKSLVAPLPTLYSSPFRGLVKSMLRKNPELRPSAAELLNHPHLQPYIHKIHLKLNTPRRSTFPFQWHDSSYLRRNRFFEPESVSTISDRYKRLSFSNDRALNPSISGTEVGSLCSAQRAQGSFTYSKERLYDLSVGCVREELNANKSKAAKFSAFDRTPRSQAGKVSTPRRPIIPSIAHTSSKRDSLPASPAAKFAPPTRRASLPLLTPSTGVMATATPYRASVGLLRSLDSPDISVNAPRIDKMAEFPLASCEGNHFFPVRGTSSTSAHCSSSSPGSAECSFTKDKCTVQVVDKASVPTITTGVNSTPAPVSHGSECSEPGATIVSSHSSADSRQRRFDTSSYQQRAEALEGLLEFSARLLQQQRFEELGVLLKPFGPEKVSPRETAIWLTKSFKETAA 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00868 615 FunFam Serine/threonine-protein kinase Nek3 86 332 - -
Arst2g00868 615 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00868 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Arst2g00868 615 Gene3D Transferase(Phosphotransferase) domain 1 86 303 - -
Arst2g00868 615 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00868 615 MobiDBLite consensus disorder prediction 521 547 - -
Arst2g00868 615 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00868 615 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Arst2g00868 615 MobiDBLite consensus disorder prediction 521 553 - -
Arst2g00868 615 SUPERFAMILY Protein kinase-like (PK-like) 1 319 IPR011009 -
Arst2g00868 615 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Arst2g00868 615 CDD STKc_Nek 3 258 - -
Arst2g00868 615 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 571 - -
Arst2g00868 615 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00868 Arst-Chr2 9906220 9912264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00868 10 259 MAP Kinase Kinase Kinase AT1G53570 30.588 2.78e-36 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Arst2g00868 Pkinase 1.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00868 K08857 - gmx:100810347 968.763