Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00742 ATGGAATTCCCCTCTTCTTCTTTGCAAATCACTCCCATTGAAGATCCATCCATACCACAACAGTTTGATTTCGATGATTGCTTCTCCATCATCTTCAATTGCACCAAAAAATTGATCCAAATTATTGAAAGCTCAAACCCAGCTCCTGAGATTCACTCTTCTTCTACGACAACTACAGCCATGGAAGCAATCTTGGTTCCTTCAGACATCCTATGTAGTGGTACTCCACTCACAGACCTCAGCAGAGAAGACACAATCTTGTTACATGAAATCTTTTCTTCACTATCTGTGTCCCCTGAGCTATTTGACCAAATTTTATCTAACATAGTCGAAACTGCAAGAAGGTGTGACTCCAACACACGGGAGATTGTTGTGAACCTTCATGTTACTTCGTACAATGTTGTTCAAGATTCTGATGAGCAAGATGATGATGCCGAATGCGCCATTTGTTTGGAGAAGTTTGACCATGGTAATGAAGATTCAAGCGTAGATATTGTTCGTACAAATTGCTCGCATGTTTTTCATAATCGCTGCTTACTCCCGTGGCTCCGATGCTGTGCCAACTGTGAGTCGCCACATTCTTGCCCATTGTGCCGCAGCATCCTATTTCCAACTTCAGAGATAGATGATGAATAG 636 0.4198 MEFPSSSLQITPIEDPSIPQQFDFDDCFSIIFNCTKKLIQIIESSNPAPEIHSSSTTTTAMEAILVPSDILCSGTPLTDLSREDTILLHEIFSSLSVSPELFDQILSNIVETARRCDSNTREIVVNLHVTSYNVVQDSDEQDDDAECAICLEKFDHGNEDSSVDIVRTNCSHVFHNRCLLPWLRCCANCESPHSCPLCRSILFPTSEIDDE 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00742 211 CDD RING-H2 147 199 - -
Arst2g00742 211 ProSiteProfiles Zinc finger RING-type profile. 147 199 IPR001841 -
Arst2g00742 211 PANTHER RING ZINC FINGER PROTEIN-RELATED 127 207 - -
Arst2g00742 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 203 IPR013083 -
Arst2g00742 211 Pfam Ring finger domain 146 199 IPR001841 -
Arst2g00742 211 SUPERFAMILY RING/U-box 135 205 - -
Arst2g00742 211 SMART ring_2 147 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00742 Arst-Chr2 7906216 7906851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00742 147 203 C3H Transcription Factor Family AT4G12190 47.368 3.18e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00742 - - adu:107495458 323.553