Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00712 ATGGAAGCAGCTACAGCAGCTACTACTTCCTCTCAGTCTTGCCAGAGAAAGCTGAAGAGAAAGCGCGCCGCCGCGTTGGTGAGTGACCCCCAACTCGACCGACTTAACTCGCTGCCTTGGAACCCTTCGTTTCCACGAAACAATGACGAAGATGATAACAACAACGAAAACGATCCCTTTGCTATGCTCGCTACTGGCTCCAACGAGCTCGAAGGAGGTTTCCTCTCGCTCGAGGAGATCGACGAGGCTGATTACGGTTTTTCCATTCCTGAACCTCAAATTAACGAGAAGAAGAACCAGAAGAAGAAGCATAAACTCGACGAGAATGTGATAGAAGAGAAGAAGAAGAAGGAAGAAGAAGAAGAAGATGATGGAGTTGGCGGTGGCGGCGGCGGTGGTAGCGGTGAGGTTGAAGTGAAGAAGGAAAAGAAAAAAGACAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGACAAAGAAGGATAAGAAGAAGGAGGAGGAAGAAAAGAAGGATAAGAAGAAGGAGGAGGAGGAAAAGGAGGAGAAAGCGGTTACCGAAAACCAGAATGTTGAGAAGCCAGATACTGGTCTAGATACTGATGTGAAGGATGATGATGATGTTGGGGAAGACTTTGATGAAACTGAATTTTATGCATGGAATGAGTTGAGGTCAAGGGAAGTGTGTGTTTTTCGGCAGGATGTTGTTGGGGCTGCTGAGACAGGATCTGGTAAAACACTTGCATTTGGTTTGCCCATTTTGCAACGTATTTTGGAGGAACGGGAGAAGGCTACAAAGATTGAGGAAGAAAGGGGTAAAGAGCCAGAAAAATATGCTCCTACAGGAATTTTGAGGGCTCTAATTGTTGCCCCAACCAGAGAGCTTGCTATTCAGGTAACTGATCATCTGAAAGCAGTAGCTAAGTATATTAATGTTAGGGTGACCCCTATTGTTGGGGGAATTTTAGCCGAAAAGCAGGAGAGACTTTTAAAATCAAGACCTGAGATTGTTGTTGGAACTCCAGGGAGGTTGTGGGAACTTATGTCAAGTGGAGAAAAGCATCTAGTTGAGTTACATTCATTGTCTTTCTTTGTGCTTGATGAGGCTGATCGAATGGTACAAAACGGTCATTTTAAGGAGTTGCAATCAATAATTGACATGCTTCCCATGTCAAATATCTCCGCCGAAGATAATTCTCAACATGCACAAAATTGTGTTACAGTTTCAAGCTACCAAAGAAAGAAAAGACAAACTCTTGTGTTTTCAGCTACTGTTGCACTTTCTGCTGATTTTCGCAAGAAGCTTAAGTGCGGTTTAGTAAAACAAAAACAATCATTCACAGAGGAACTGAATTCTATTGAAACTCTTTCTGAACGAGCTGGAATGAGATCCAATGCTGCAATTATTGATCTTACCAACCCGTCAATATTGGCAGCCAAGCTTGAGGAATCATTTATTGAATGCAGGGAAGAAGATAAAGATGCCTACTTGTATTATATTTTGACTGTCCATGGACAAGGTCGCACCATAGTTTTCTGTACATCAATTGCAGCTTTGCGCCATATTTCTTCCATACTGCGGATTCTTGGCATTGATGTTTGGACTCTGCATGCACAAATGCAGCAGCGAGCACGTTTAAAGGCCATGGATCGTTTTCGTGAAAGTGAAAATGGCATACTAGTTGCTACGGATGTTGCTGCAAGGGGTCTTGATATTCCTGGTGTTAGAACTGTTGTCCACTATCAGCTTCCGCATTCAGCAGAGGTTTATGTGCATAGAAGTGGAAGAACAGCTAGAGCTTCTGCTGAAGGTTGTAGCATTGCTTTAGTCTCACCAAAAGAAACGGCAAAGTTTGCTTCGCTGCTCAAATCATTTTCTAAGGACAATTTTCAGCGGTTTCCTTTACAGAACTCATACATGCCAGAGGTTTTAAAACGATTGTCTCTTGCACGCCAAATTGACAAAATAACACGAAAGAATTCGCAGGTGAAAGCTGAGAAAAACTGGTTTGATCGAAATGCTAACTCAGTTGAATTAGTTACTGAAAATGACGACAGTGAGGAGGAACAAGTGAACAAACACAAGCAAATGAAAGCCAGTTCTAAACAGTTGAAGACATTGCAACAGGAGCTCAAAATGTTGATTTCACGTCCTTTACAATCAAAGACATTTTCACATCGATATTTAGCAGGGGCTGGTGTCACACCTGTCATGCAGGAACAATTGCTACAATTAGCAAAGCAAAAACTAAATGATCGCCCGGGCTCAGGAGTAGGCAAGAAGGGAAAATTGGTTGTGATTGGTCAAGATTGTGTTGAAGCACTTCAGGCACTCCGGAATGCTGGTGAAGAGGTGCGCATGGATGTCAAGGATTTTGCTGGAAAACAGAGAAATATAGAAAATCGGAAAAGAAAAAGAAAAGAGGAGAAGAAACGTTTGCGTGATCAGCGAAGAAAGCAGAAGAAAAAGCTAAAACAGGACAATCAATAG 2484 0.4243 MEAATAATTSSQSCQRKLKRKRAAALVSDPQLDRLNSLPWNPSFPRNNDEDDNNNENDPFAMLATGSNELEGGFLSLEEIDEADYGFSIPEPQINEKKNQKKKHKLDENVIEEKKKKEEEEEDDGVGGGGGGGSGEVEVKKEKKKDKKKKKKKKKKTKKDKKKEEEEKKDKKKEEEEKEEKAVTENQNVEKPDTGLDTDVKDDDDVGEDFDETEFYAWNELRSREVCVFRQDVVGAAETGSGKTLAFGLPILQRILEEREKATKIEEERGKEPEKYAPTGILRALIVAPTRELAIQVTDHLKAVAKYINVRVTPIVGGILAEKQERLLKSRPEIVVGTPGRLWELMSSGEKHLVELHSLSFFVLDEADRMVQNGHFKELQSIIDMLPMSNISAEDNSQHAQNCVTVSSYQRKKRQTLVFSATVALSADFRKKLKCGLVKQKQSFTEELNSIETLSERAGMRSNAAIIDLTNPSILAAKLEESFIECREEDKDAYLYYILTVHGQGRTIVFCTSIAALRHISSILRILGIDVWTLHAQMQQRARLKAMDRFRESENGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALVSPKETAKFASLLKSFSKDNFQRFPLQNSYMPEVLKRLSLARQIDKITRKNSQVKAEKNWFDRNANSVELVTENDDSEEEQVNKHKQMKASSKQLKTLQQELKMLISRPLQSKTFSHRYLAGAGVTPVMQEQLLQLAKQKLNDRPGSGVGKKGKLVVIGQDCVEALQALRNAGEEVRMDVKDFAGKQRNIENRKRKRKEEKKRLRDQRRKQKKKLKQDNQ 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00712 827 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 363 371 IPR000629 -
Arst2g00712 827 MobiDBLite consensus disorder prediction 144 159 - -
Arst2g00712 827 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 478 639 IPR001650 -
Arst2g00712 827 Gene3D - 137 434 IPR027417 -
Arst2g00712 827 Pfam Helicase conserved C-terminal domain 490 598 IPR001650 -
Arst2g00712 827 MobiDBLite consensus disorder prediction 793 827 - -
Arst2g00712 827 MobiDBLite consensus disorder prediction 797 819 - -
Arst2g00712 827 MobiDBLite consensus disorder prediction 1 67 - -
Arst2g00712 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 387 IPR027417 -
Arst2g00712 827 Pfam DEAD/DEAH box helicase 230 424 IPR011545 GO:0003676|GO:0005524
Arst2g00712 827 CDD SF2_C_DEAD 479 608 - -
Arst2g00712 827 CDD DEADc_DDX24 230 468 - -
Arst2g00712 827 PANTHER RNA HELICASE 151 798 - -
Arst2g00712 827 MobiDBLite consensus disorder prediction 160 198 - -
Arst2g00712 827 MobiDBLite consensus disorder prediction 34 48 - -
Arst2g00712 827 Coils Coil 794 825 - -
Arst2g00712 827 Gene3D - 476 714 IPR027417 -
Arst2g00712 827 MobiDBLite consensus disorder prediction 85 206 - -
Arst2g00712 827 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 224 441 IPR014001 -
Arst2g00712 827 SMART ultradead3 206 451 IPR014001 -
Arst2g00712 827 Coils Coil 140 188 - -
Arst2g00712 827 Coils Coil 695 715 - -
Arst2g00712 827 SMART helicmild6 518 599 IPR001650 -
Arst2g00712 827 MobiDBLite consensus disorder prediction 95 123 - -
Arst2g00712 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 283 614 IPR027417 -
Arst2g00712 827 Coils Coil 101 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00712 Arst-Chr2 7539873 7546548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00712 231 639 Eukaryotic Initiation Factors Gene Family AT5G11170 26.988 1.58e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00712 K14805 - gmx:100806018 985.711