Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00702 ATGGGAGAAATTTTTGATTCTGTTCTAGATGTCAATGCTAAAACACTTCATTGGAATTTTAAAGTATATGTCATAAGAATCTGGGAGGTTCCTAGCAAGTTTAATAACAATGAAGTTAATAGTATTGAAATGGTGCTTCAAGATAACAAGGGTGGGAGAATCCACGCTTCCATTCCAAGGGCAGTTGCTAATAGAAAATGGAGGGGTGTCATTGAGGCTTTTCAGATGTACATTATGTCAAATTTTGTGGTATTGAAAAACACTACCAAGACCAAGACATACCCTAGCCAGTGGTTACTCATGTTCTCACACAGGACACGTGTTAATCACGTGGAAAATCCTTCTTTCCCACTTGAAGCTTTCCATTTCAAGACCATTCCTGACTTGGTCACTGCACAGAAGATCGATGAGAACGATATTGTTGATCTCATTGCCGAGGTTGTTGGAAAGGCCGATCATAGGGACTTAGTCACCAGCAAGGGAATGGAGACAAAACGTTTGGTTTTAGAACTAAAAGATTTAGAGAACAACCGTATTCACTGCATTTTGTTTGGTGAAATGGTTGACCAAATCTTACCACATCTTCAACATGAGAGGGTAGAGCCACTCATTGTGGTGTTTCAGCTATTTAAGGCTCATAGGTGGAATGGCCAAACATCTATTCAGAGCAACTTCAACGTGTCAAAGCTGCACATTAACCCAGAATTAAAAGAAGTGGTTTTGTTTAGAGACAGGTTGCTAAGTGGTGCATCATCAAACTCTGTGAGGATTAGTCAAATGTCTTCACAAGGTGCTTCCTCCGGTATTGATGAGCTTACCGTAGGATCTGCTATTGTCAAATCAATCGATGAAGTGCTAACAAGTACTGAGGAAGGCACAGTTTGGATTGTTGGAACCATTGTTTCAATAAATGCGGGCAAAGAAGATTGGTTTTACAAGTCATGTCGCAAGTGTCCAAAGAAGGTTGAAACTCCAATTGGTAATAGATATGAATGTACTAAATGTGGTCACACACATGGGTGTGCAGCCTTGAGGTACAAGGTGGAGATTATGGTTCATGATGGAACAGGGAGTATCAACTTGCTGTTGTGGGACAGAGAAACCTTTCAACTATGTGGAAAACAAGCGGAAAAAGTTAAGGAGGAAGAGGTCACAAGTGGAGATAAATATCCAGCCACACTTGACAATATGATGGATAAGAGGGTTTTTTTTAAGATTAATGTGAAAGCTGCAAATATCAACCACTATGATCAACTCTTTACTATTATGAAGATCTGTGATGATTATGAAATTATTGAGAAGAACATCCCAGTAATTGACACAACCAACCCCGCTAACAATGTTGAGGACAATGGATGCAGCAACTCGCTGGATTTTTCGGAGAATGTTGTTAATCTCAACACTGATAATGATACTCAGCGTACAATGGATGGTATGGAAGAGTGTATATCCAACCTCAAGTACAAAACTCCAGCTAAGAGAGCTTGCAGCGAAATGAAGCCAGCCTCTAATGGGCTTAACCACATTGAGAAAGAAGGACAATTGTCAACAAATAAGTTCAGCAGAAAAGATTCCAAGAAGCAAAAGTCACTAATGAATGAAGTGGATAACTGA 1614 0.3971 MGEIFDSVLDVNAKTLHWNFKVYVIRIWEVPSKFNNNEVNSIEMVLQDNKGGRIHASIPRAVANRKWRGVIEAFQMYIMSNFVVLKNTTKTKTYPSQWLLMFSHRTRVNHVENPSFPLEAFHFKTIPDLVTAQKIDENDIVDLIAEVVGKADHRDLVTSKGMETKRLVLELKDLENNRIHCILFGEMVDQILPHLQHERVEPLIVVFQLFKAHRWNGQTSIQSNFNVSKLHINPELKEVVLFRDRLLSGASSNSVRISQMSSQGASSGIDELTVGSAIVKSIDEVLTSTEEGTVWIVGTIVSINAGKEDWFYKSCRKCPKKVETPIGNRYECTKCGHTHGCAALRYKVEIMVHDGTGSINLLLWDRETFQLCGKQAEKVKEEEVTSGDKYPATLDNMMDKRVFFKINVKAANINHYDQLFTIMKICDDYEIIEKNIPVIDTTNPANNVEDNGCSNSLDFSENVVNLNTDNDTQRTMDGMEECISNLKYKTPAKRACSEMKPASNGLNHIEKEGQLSTNKFSRKDSKKQKSLMNEVDN 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00702 537 MobiDBLite consensus disorder prediction 502 537 - -
Arst2g00702 537 CDD RPA1_DBD_A_like 21 108 - -
Arst2g00702 537 Pfam Replication factor-A C terminal domain 298 417 IPR013955 -
Arst2g00702 537 CDD RPA1_DBD_B_like 157 246 - -
Arst2g00702 537 Pfam Domain of unknown function DUF223 43 115 IPR003871 -
Arst2g00702 537 Gene3D - 257 434 IPR012340 -
Arst2g00702 537 Gene3D - 115 256 IPR012340 -
Arst2g00702 537 MobiDBLite consensus disorder prediction 515 537 - -
Arst2g00702 537 SUPERFAMILY Nucleic acid-binding proteins 121 246 IPR012340 -
Arst2g00702 537 PANTHER OS03G0429900 PROTEIN 9 430 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst2g00702 537 SUPERFAMILY Nucleic acid-binding proteins 8 115 IPR012340 -
Arst2g00702 537 SUPERFAMILY Nucleic acid-binding proteins 282 426 IPR012340 -
Arst2g00702 537 Gene3D - 6 110 IPR012340 -
Arst2g00702 537 CDD RPA1_DBD_C 279 425 IPR047192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00702 Arst-Chr2 7425704 7428805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00702 8 379 Core DNA Replication Machinery Family AT2G06510 22.222 1.74e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00702 - - aip:107630584 594.349