Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00683 ATGTTGGACTACGAATGGGGGAACCCATCCATAATGCTCACCGGGAACGAAGACGGCGCAGCGCCACCGCCCTCCGACCAAACTCACCGCCAAATCTTCGACCACTACGCCTCTCACGCCCTACTGCCCGACCACTTCCTGCATGGGCCCGGCGCCACAACCACAGCTCACAATAACGCAAACAACCCCACCACCACCATCGACCTCTCTCATCATCACTTCAGCCCGCAACAAACCCATCACCACGTCCCCCACAGCTTCTTCGACCCACGGGCCTTCCATGCGGCCTCCTCCACCCACTACCCACCGCCCCAACCCCCGCCTCCCCCATCCATGCTTTCCCTTGACCCGTTACCCCACCACGCCCACTGCGGGCCCGGCCATGGGCTCATGCTGGTGCCGAAATCTGAGGATGTCGGTCGGCCCATGGACTTCGTGGGCTCTCGAATTGGGCTGAACCTGGGAGGGCGCACCTACTTCTCGTCCTCGGAGGATGACTTCGTCAGCAGGCTGTACCGCAGGTCTCGGCCCGCCGAACCGGGGTCGACGGCGTCCTCTAACTCCCCTCGGTGCCAGGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCAGGCGAAGCACTACCACCGCCGCCACAAAGTGTGCGAGTTCCACTCTAAGGCCTCCACCGTCATCGCCGCCGGGTTGACTCAGCGATTCTGCCAACAATGCAGCAGGTTCCATCTTCTCTCTGAGTTCGATAACGGAAAACGTAGCTGCAGGAAGAGACTGGCAGATCATAATCGTCGCAGAAGAAAAACTCAGCAGCCACCAGCACAAGACATCCACAAATCTCAGCCTGCTACTAATTTGGATAACGTTGCAAGGTCCCCACCGGAGTCCGGAGCTCAGTCATCTTCGTCCGTAACGGTGGCCGTGTCGCCACCTGATTACTTCCGGCAAAGGCCGTACCAAACCGGAAGCCCATCAACGACTTCAAGTTCACTGTTTTTCTCAAGCGGGCAGTAG 1023 0.5718 MLDYEWGNPSIMLTGNEDGAAPPPSDQTHRQIFDHYASHALLPDHFLHGPGATTTAHNNANNPTTTIDLSHHHFSPQQTHHHVPHSFFDPRAFHAASSTHYPPPQPPPPPSMLSLDPLPHHAHCGPGHGLMLVPKSEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPAEPGSTASSNSPRCQAXXXXXXXXXXXXXXSQAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPPAQDIHKSQPATNLDNVARSPPESGAQSSSSVTVAVSPPDYFRQRPYQTGSPSTTSSSLFFSSGQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00683 340 MobiDBLite consensus disorder prediction 259 340 - -
Arst2g00683 340 MobiDBLite consensus disorder prediction 319 340 - -
Arst2g00683 340 MobiDBLite consensus disorder prediction 1 29 - -
Arst2g00683 340 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 174 330 IPR044817 GO:0003677
Arst2g00683 340 MobiDBLite consensus disorder prediction 47 135 - -
Arst2g00683 340 SUPERFAMILY SBT domain 208 274 IPR036893 GO:0003677|GO:0005634
Arst2g00683 340 MobiDBLite consensus disorder prediction 100 115 - -
Arst2g00683 340 MobiDBLite consensus disorder prediction 173 194 - -
Arst2g00683 340 Pfam SBP domain 207 271 IPR004333 GO:0003677
Arst2g00683 340 ProSiteProfiles Zinc finger SBP-type profile. 188 272 IPR004333 GO:0003677
Arst2g00683 340 Gene3D - 189 259 IPR036893 GO:0003677|GO:0005634
Arst2g00683 340 MobiDBLite consensus disorder prediction 52 73 - -
Arst2g00683 340 MobiDBLite consensus disorder prediction 277 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00683 Arst-Chr2 7074473 7077907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00683 1 245 SBP-box Gene Family AT1G02065 45.020 9.52e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Arst2g00683 SBP 5.6e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00683 2 7074473 7077907 Arst2g00683 2 7074473 7077907 ECH
Arst2g00683 2 7074473 7077907 Arst4g02619 4 95786506 95787342 PCT