Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00665 ATGCGCGATTTAGATGCAAAAATAGATTACATAAGGAAAGGGCCATGGAAGAAAGAGGAAGATGAAGTGCTACTCAACCATGTAAGCAAGTATGGCCCCAGAGACTGGAGCTCCATTCGATCCAAGGGTCTTCTTCATAGAACCGGCAAGTCTTGTCGCCTTCGTTGGGTCAACAAGCTTCGACCTAACCTCAAGAATGGGTGCAAGTTTACAGCGGAGGAAGAGAGGGTTGTGATAGAATTGCAGGCACAATTTGGGAACAAATGGGCTAAGATTGCGTCCTATTTGAGTGGAAGAACAGACAATGATGTCAAGAATTTCTGGAGCAGTAGGCAGAAGAGGCTTGCTAGGATTCTTCAGGCATCAACATCCACCTCCAAATCACACAGGAACAAACCTAAACTTCATCATCATCTTCCCACTTTCCAGGCTCCTAAATTGAGTTCTTCATCAGAGGGAGAATCATCATCAAAGCCTCATCAGCCATGCTTGTTCTCCTGCAATGACAATTCCGAGGTTATTAAAATGGTGGCATTACCAGATCTTATCAAGCCCAAGTTGCCTAATTCTGAGCAAGAAGAATCTGCACTTTTTGAGAGCAATAAAAGCAGTAGTATGATGGAACAAATTCCCTTCCCTCAAATTCCTGATGAACTCCAAACTGATCTAACACCATTCTCATTGGGAGACCAAGATTTCTTGACTAGAATTGATGATCCAAATTTTGCTGATTACTTTGGACCTCTCGGTGCATATGAGCTTGGGCTAGCCCCACAACACACCATTGGGTTCCCTTTCTTTGATCCATCAGAAGGAAGTTGCAGAATTGGGTCAACGGATATCATAGGTAGCTCCAAAAACTATGACAGCATATTTGATGATCTCCCAGTTAACATGTTTGATCATATGGATCCACCTTCAATTCCTTCCAAGCTCTGA 939 0.4324 MRDLDAKIDYIRKGPWKKEEDEVLLNHVSKYGPRDWSSIRSKGLLHRTGKSCRLRWVNKLRPNLKNGCKFTAEEERVVIELQAQFGNKWAKIASYLSGRTDNDVKNFWSSRQKRLARILQASTSTSKSHRNKPKLHHHLPTFQAPKLSSSSEGESSSKPHQPCLFSCNDNSEVIKMVALPDLIKPKLPNSEQEESALFESNKSSSMMEQIPFPQIPDELQTDLTPFSLGDQDFLTRIDDPNFADYFGPLGAYELGLAPQHTIGFPFFDPSEGSCRIGSTDIIGSSKNYDSIFDDLPVNMFDHMDPPSIPSKL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00665 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 116 IPR017930 -
Arst2g00665 312 Gene3D - 68 139 - -
Arst2g00665 312 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst2g00665 312 MobiDBLite consensus disorder prediction 121 162 - -
Arst2g00665 312 Pfam Myb-like DNA-binding domain 16 66 - -
Arst2g00665 312 ProSiteProfiles Myb-like domain profile. 12 60 IPR001005 -
Arst2g00665 312 PANTHER TRANSCRIPTION FACTOR DUO1 7 310 - -
Arst2g00665 312 SMART sant 66 114 IPR001005 -
Arst2g00665 312 SMART sant 12 62 IPR001005 -
Arst2g00665 312 CDD SANT 15 60 IPR001005 -
Arst2g00665 312 CDD SANT 69 108 IPR001005 -
Arst2g00665 312 Gene3D - 13 65 - -
Arst2g00665 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 64 IPR017930 -
Arst2g00665 312 MobiDBLite consensus disorder prediction 143 162 - -
Arst2g00665 312 FunFam Transcription factor GAMYB 68 137 - -
Arst2g00665 312 Pfam Myb-like DNA-binding domain 69 108 IPR001005 -
Arst2g00665 312 ProSiteProfiles Myb-like domain profile. 69 112 IPR001005 -
Arst2g00665 312 FunFam MYB transcription factor 13 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00665 Arst-Chr2 6811673 6813393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00665 1 310 MYB Transcription Factor Family AT3G60460 48.598 6.11e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst2g00665 Myb_DNA-bind_6 5.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00665 K09422 - gmx:100805384 391.734