Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00630 ATGTGTGGAGGTGCTATTATCTCCGACTTCATTCCCGGCGGTTCCGCCGCCGCGGCGTCGCGTTCACGGCGGGTTACGGCGGACATCCTGTGGCCAAACCTGAGGAAGCCAGTGAGCAAGTCCGGCAAGAGGAGGGGCGGTGCCGGCGCCGGTGTGGTGGCGGTTGATGATGACTTTGAGGCTGATTTCAGAGAGTTTAAGGACGACTCTGACATCGACGAGGACGAGGATTATGACGTTGATGATGTCGTTGGCGGTGGTTCTGTCAAGGGTTTTGGATCATTCGGTTCAACCAAAACCGCCAAGCCTCAGCTCAAAGCTCGTGGACCTGCTGCTGTGAAATCCATGGAGCCAAGTGGACAGGTTGAGAAATCTGCTAAGAGAAAGAGGAAGAACCAGTTTCGGGGAATCCGTCAGCGTCCATGGGGGAAATGGGCGGCTGAGATCCGCGACCCGAGAAAGGGTGTTCGTGTCTGGCTTGGGACATTCAGCACTGCTGAAGAAGCCGCAAGGGCTTATGATGCTGAAGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAACTTCCCCGAGGAGGTTCCGGCCGCGTCCTCAAAGAGGTTCAAGCCACATCCCGAAATGCAGCTCCCTAAGGAGAAAATGAACTGTGCTAAGCCCAAACTGAACAACCAGATGTTTGACTTTGGTAACGAACTCGGGGACTTCTACTCTCAGTTGGATCAGGTGGAACAGAAGCCTCTGATTAACCAATATGCTAACATGGAGTCATTCCCCGGAAATGGACTTTTAAATGCATCTGATGATGTGGCTGCTTATTTCACTTCGGAACACTCGAGCAATTCATTTGAGTATTCCGACCTTTCATGGGGCGAGCAGGGCCCGAAGACTCCCGAGATATCATCCATGCTCTCGGCTCCCGTCGAAGTGCAGGGTGTGGCTAAGCAAGAGAAGAACATGGTGCAGCCTAACAACACTCAAGATGACTCTGCAAAGACACTATCCGAGGAGCTTGCAGATATGGAATCACAGCTGAAGTTCTTCGACACTCCTTACCTCGATGCAAGCTGGAACGATACTTCATTGGAATCCTTCCTTGGTGTGGACTCAACACAGGATGTTGGAAACCCAATGAACCTTTGGAGCTTCGATGACCTCCCTTCCGTGGGAGGCGGAGTCTTCTAA 1182 0.5262 MCGGAIISDFIPGGSAAAASRSRRVTADILWPNLRKPVSKSGKRRGGAGAGVVAVDDDFEADFREFKDDSDIDEDEDYDVDDVVGGGSVKGFGSFGSTKTAKPQLKARGPAAVKSMEPSGQVEKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPEEVPAASSKRFKPHPEMQLPKEKMNCAKPKLNNQMFDFGNELGDFYSQLDQVEQKPLINQYANMESFPGNGLLNASDDVAAYFTSEHSSNSFEYSDLSWGEQGPKTPEISSMLSAPVEVQGVAKQEKNMVQPNNTQDDSAKTLSEELADMESQLKFFDTPYLDASWNDTSLESFLGVDSTQDVGNPMNLWSFDDLPSVGGGVF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00630 393 SMART rav1_2 133 196 IPR001471 GO:0003700|GO:0006355
Arst2g00630 393 Gene3D AP2/ERF domain 132 192 IPR036955 GO:0003700|GO:0006355
Arst2g00630 393 PANTHER DNA-BINDING DOMAIN 110 313 IPR044808 GO:0003700|GO:0009873
Arst2g00630 393 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
Arst2g00630 393 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Arst2g00630 393 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700|GO:0006355
Arst2g00630 393 FunFam Ethylene-responsive transcription factor 2 132 191 - -
Arst2g00630 393 Coils Coil 323 343 - -
Arst2g00630 393 MobiDBLite consensus disorder prediction 100 136 - -
Arst2g00630 393 CDD AP2 133 191 IPR001471 GO:0003700|GO:0006355
Arst2g00630 393 SUPERFAMILY DNA-binding domain 133 191 IPR016177 GO:0003677
Arst2g00630 393 Pfam AP2 domain 134 182 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00630 Arst-Chr2 6441188 6444123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00630 1 393 AP2-EREBP Transcription Factor Family AT3G14230 44.258 1.96e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst2g00630 AP2 8.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00630 K09286 - gmx:100818646 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00630 2 6441188 6444123 Arst2g00630 2 6441188 6444123 ECH