Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00613 ATGGACACCATCAAGTCCTTCAAGGGCTACGGCAAAGTCGATGAGGCCGAGCAACAAGCCTATCAGAAGAAGACACGTAAGCGAATTATAATCCTAATCGTCTCATCACTAATCCTCTCAGCGGCGATTATTGCCGCAGTGGCAGGAATCGTCATACACAACCGCAACACCAAATCATCATCATCATCTTCTAACTCGGTCCCAACACCCGAGTTAACTCCGGCCGCGTCACTCAAAGCGGTTTGCGATGTGACTCAGTACCCTAACTCGTGCTTCTCCGCCATTTCCGCCGTCGCAAACACCAACACTACTGATCCCAAGCTCCTCTTCCGCCTCTCCCTCCGCGTCGCCATTGACGAGCTCTCCAAGCTCGCGAAGCAGCTTCCCTCCAAGCTTCGCGAATCTACGAAGAACGATTCACGACTCCAAAAGGCGATCGATGTGTGCGAAACCGTGGCGGGGAAGATAACCGATCTGGAAACATGGCTGAGCGCGGCGATAACGAACCAGGAAACGTGCATTGACGCGATCTCCGATGTGGATTCCACCGCTGAGCACGGCGTTGTCGGAGAAGTTCAAACGGCGATGAAGAACTCTACAGAGTACGCGAGCAACAGCTTGGCGATTGTGACGAGGATCTTAGGGCTGATTTCGAAGTTCGATTCGCCGGTGCACCGGCGGCGGTTACTCGGGTTTCCGGAGTGGGTGACGGCGGCGGATAGGAGGCTGCTGGCGGGGAATGTGAACGAAACGGAGACTCATGTGGTGGTGGCGCAGGACGGAAGCGGTGACTACACCACCATCACGGCGGCGGTGAATGCCGTGAAGAAGAAGAGCTTGAAGAGGCACGTGATTTACGTGAAGACAGGAATTTACAGAGAGAACATCGATTTGGATAAGAACACTTGGAATGTGATGATCTACGGTGATGGTAAGACGAAAACCATCGTCACAGGTAACCGGAACTTCATCGACGGCGTTCCTACATTTGAGACTGCCACTTTCGCCGTTAAAGGAAAGGGATTCATAGCTAGAGACATAGGTTTCATAAACACCGCAGGCGCATCGAAGCACCAAGCTGTGGCGCTCCGGTCCGGCTCAGACCGCTCCGTGTTCTACCGGTGCTCATTCATTGGCTACCAAGACACCCTATATGCCCACTCCAACCGCCAATTCTACCGTGAATGTGACATCACAGGCACCATAGACTTCATATTTGGCAATGCAGCAGTTGTATTCCAAAGCTGCAAGATCATGCCAAGGCAGCCACTCCCAAACCAGTTCAATACCATTACAGCCCAAGGAAAGAAGGACCCTAACCAGAACACTGGCATTGTGATCCAGAAATCCACAATCACTACCCTTGATAAGGACAATCTCACTCTCACTGCCCCAACATACCTTGGTAGGCCATGGAAAGATTACTCCACCACTGTGATCATGCAATCTGAGATTGGCTCATTCTTGAAGCCAATTGGGTGGATAAGTTGGATACCCAATGTAGAACCTCCTAATACCATTTTCTATGCTGAGTACCAGAACAGTGGGCCTGGGTCAGATGTGGCCCAGAGGGTTAAATGGGCTGGGTACAAGCCCACTCTCACTGATCTTGATGCAGGAAAGTACACGGTCCAGTCATTCATTCAAGGCCAAGAGTGGCTTAAAGATGCTTCTGTAGAATTTGAGTCTACTTTATGA 1698 0.5124 MDTIKSFKGYGKVDEAEQQAYQKKTRKRIIILIVSSLILSAAIIAAVAGIVIHNRNTKSSSSSSNSVPTPELTPAASLKAVCDVTQYPNSCFSAISAVANTNTTDPKLLFRLSLRVAIDELSKLAKQLPSKLRESTKNDSRLQKAIDVCETVLDDALDRLNESIGVADEGRKVLAAGKITDLETWLSAAITNQETCIDAISDVDSTAEHGVVGEVQTAMKNSTEYASNSLAIVTRILGLISKFDSPVHRRRLLGFPEWVTAADRRLLAGNVNETETHVVVAQDGSGDYTTITAAVNAVKKKSLKRHVIYVKTGIYRENIDLDKNTWNVMIYGDGKTKTIVTGNRNFIDGVPTFETATFAVKGKGFIARDIGFINTAGASKHQAVALRSGSDRSVFYRCSFIGYQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIVIQKSTITTLDKDNLTLTAPTYLGRPWKDYSTTVIMQSEIGSFLKPIGWISWIPNVEPPNTIFYAEYQNSGPGSDVAQRVKWAGYKPTLTDLDAGKYTVQSFIQGQEWLKDASVEFESTL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00613 588 PANTHER PECTINESTERASE 39 578 - -
Arst2g00613 588 Pfam Plant invertase/pectin methylesterase inhibitor 78 232 IPR006501 GO:0004857
Arst2g00613 588 ProSitePatterns Pectinesterase signature 1. 302 321 IPR018040 -
Arst2g00613 588 Pfam Pectinesterase 277 573 IPR000070 GO:0030599|GO:0042545
Arst2g00613 588 CDD PMEI-like_3 80 236 - -
Arst2g00613 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 237 IPR035513 -
Arst2g00613 588 Gene3D - 271 588 IPR012334 -
Arst2g00613 588 ProSitePatterns Pectinesterase signature 2. 421 430 IPR033131 -
Arst2g00613 588 FunFam Pectinesterase 74 237 - -
Arst2g00613 588 NCBIfam pectinesterase inhibitor domain 64 234 IPR006501 GO:0004857
Arst2g00613 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 76 237 IPR035513 -
Arst2g00613 588 SMART PMEI_2 73 232 IPR006501 GO:0004857
Arst2g00613 588 SUPERFAMILY Pectin lyase-like 276 584 IPR011050 -
Arst2g00613 588 FunFam Pectinesterase 271 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00613 Arst-Chr2 6193162 6197250 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00613 1 577 Carbohydrate Esterase AT1G53840 55.912 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00613 - - gmx:100784642 856.67