Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00610 ATGTCTAAGTTAAAACAAGCATTCACCCAACTCACTCATTCTTCCACTAACAACAACAAGAAAAAGAAGCTCTTCTTGTCTTTCTTCGCCACCCTCCTCCTTGTCGCCTCCGTCGTCGCCATAGTCGCCGGCGTAAACTCCCACAAAAACAACACCTCCTCTTCCTCCTCCTCTCTCGCACTCTCCCACCACTCCCACACCATCATCAAAAGCGCTTGCAGCTCCACATTCTACCAAGACCTCTGTTTCTCCGCCGTCTCCTCCGAGCCTGGGGTGACAAACAAGGTCACTTCTCACAAAGATGTCATTGAATTGTCCCTCAACGTTACTTGTAGGACCGTCGAGCACAACTTCTTTGTTATCAAGAAGATTCTCGAGGAGCGGGAGAAGATCCTCACCCACAGGGAGAGGATCGCCCTCCACGACTGCCTCGAGACCATTGACGAGTCCCTTGACGAGCTCCATCAGGCCTACGAGGACATCAAGCTCTATCCTAACTCTAACAAGAAGACTCTCTACCAGCACGCCGATGATCTCAACACTCTTATCAGTGCCGCCATAACCAACCAGGTGACTTGCTTGGACGGTTTCTCGCACGACGCGGCGGACAAGAAAGTAAGGAAGGCTCTAGAAGAAGGTCAGGTACACGTGGAGCACATGTGCAGCAACGCATTGGCTATGGCGAAGAACATGACCGACACCGACATCGCAAACTACGAGCAGAAAATGATGACGACGGCGAACGGAGGAAGGAAGTTGATGATGATGGAGGAAGAAGAAGACGAGAAGGGAGTAAAGTGGCCGCAGTGGATGTCGGTTGGTGACAGGAGGCTGTTGCAGGCGGCGACGGTGGAGGCGGACGTTGTGGTGGCGGCGGACGGGAGCGGGAACTTCAAGACGGTGTCGGAGGCGGTGAAGGCGGCGCCGGAGAAGAGTAGCAAGAGGTATGTGATTAAGATCAAAGCTGGTGTATACAGAGAGAATGTTGAGGTGCCGAAGAAGAAGACGAATATAATGTTCTTGGGAGATGGAAGAACCAACACCATTATCACCGGAAGTAGAAACGTTAAAGATGGCGACACCACCTTCAACTCCGCCACCGTCGCCGTTGTGGGAGCAAACTTTCTTGCAAGAGACATAACCTTCCAAAACACAGCCGGAGCAGCAAAGCACCAAGCGGTGGCACTTCGAGTCGGTGGCGACCTCTCAGCCTTCTACAACTGCGATATCCTCGCCTACCAAGACACCTTATATGTCCACAACAACCGTCAATTCTTTGTCAATTGCCTCATCGTGGGCACCGTCGACTTTATCTTTGGTAATTCAGCCGCAGTTTTTCAAAACTGCGACATCCATGCCCGGCGCCCTGACCCTGGTCAGAAGAACATGGTCACGGCGCAGGGCAGGGTTGACCCTAACCAAAACACCGGAATTGTGATCCAAAAATGTAGGATTGGTGCCACCACGGATTTGGAGCCTGTGAAGAAGAGTTTCCCTACCTACCTTGGTAGGCCATGGAAGGAGTACTCTAGAACCGTGATCATGCAAAGCACCATAAGCGATGTGATTCAACCTGTTGGATGGCATGAGTGGAATGGAGACTTTGCATTGGACACTCTGGTTTATAGAGAGTACCAAAATACTGGGCCTGGGGCTGGTACTTCTGCTAGGGTTAACTGGAAGGGCTATAAGGTAATTACAAATGCTGCTGAGGCCCAGGCTTTTACAGCTGGGGCCTTCATTGGGGGTTCTAATTGGTTGGGCTCAACAGGCTTCCCTTTCTCTCTTGGGTTATAA 1797 0.5142 MSKLKQAFTQLTHSSTNNNKKKKLFLSFFATLLLVASVVAIVAGVNSHKNNTSSSSSSLALSHHSHTIIKSACSSTFYQDLCFSAVSSEPGVTNKVTSHKDVIELSLNVTCRTVEHNFFVIKKILEEREKILTHRERIALHDCLETIDESLDELHQAYEDIKLYPNSNKKTLYQHADDLNTLISAAITNQVTCLDGFSHDAADKKVRKALEEGQVHVEHMCSNALAMAKNMTDTDIANYEQKMMTTANGGRKLMMMEEEEDEKGVKWPQWMSVGDRRLLQAATVEADVVVAADGSGNFKTVSEAVKAAPEKSSKRYVIKIKAGVYRENVEVPKKKTNIMFLGDGRTNTIITGSRNVKDGDTTFNSATVAVVGANFLARDITFQNTAGAAKHQAVALRVGGDLSAFYNCDILAYQDTLYVHNNRQFFVNCLIVGTVDFIFGNSAAVFQNCDIHARRPDPGQKNMVTAQGRVDPNQNTGIVIQKCRIGATTDLEPVKKSFPTYLGRPWKEYSRTVIMQSTISDVIQPVGWHEWNGDFALDTLVYREYQNTGPGAGTSARVNWKGYKVITNAAEAQAFTAGAFIGGSNWLGSTGFPFSLGL 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00610 598 SUPERFAMILY Pectin lyase-like 282 597 IPR011050 -
Arst2g00610 598 NCBIfam pectinesterase inhibitor domain 56 231 IPR006501 GO:0004857
Arst2g00610 598 FunFam Pectinesterase 281 598 - -
Arst2g00610 598 FunFam Pectinesterase 65 232 - -
Arst2g00610 598 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 232 IPR035513 -
Arst2g00610 598 PANTHER PECTINESTERASE 38 588 - -
Arst2g00610 598 SMART PMEI_2 64 227 IPR006501 GO:0004857
Arst2g00610 598 CDD PMEI-like_3 71 232 - -
Arst2g00610 598 ProSitePatterns Pectinesterase signature 2. 431 440 IPR033131 -
Arst2g00610 598 Gene3D - 281 598 IPR012334 -
Arst2g00610 598 Pfam Pectinesterase 287 583 IPR000070 GO:0030599|GO:0042545
Arst2g00610 598 Pfam Plant invertase/pectin methylesterase inhibitor 68 227 IPR006501 GO:0004857
Arst2g00610 598 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 232 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00610 Arst-Chr2 6117536 6124993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00610 14 598 Carbohydrate Esterase AT3G14310 68.781 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00610 K01051 - pvu:PHAVU_010G123100g 891.723