Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00594 ATGAGTACAAAATCTGATTCAGGCAATATGTTGAATAATTCTGATGCAATTGTGATCTCTGGGAAGATCATGGTTGCAGTAGTGGTATTGCTGTCATTTGTGTTTGTTTTTGTCTTAATGCTCCATCTCTATTCCAAGTTTTCAATGTGGCGTGTTCAGCAAGAAACCTCCATTCCTTCACCACAAATCCGCCGTGGTCGCCGCCACCGGCGCCGTCGCCACCTTGTATTCGCCTCGGCCGAAGACGCTATCCTCCATGGAATTCAAAATGTTGGGCTTGACCCTTCAGTTCTTAAGTCCATACCTGTGTTGGTGTTCCAACCCCATGAATTCAAAGAGGATTTAGAATGTGCTGTTTGCATATCTGAGCTTGTTGAAGGTGAAAAGTTTAGAGCTTTGCCACATTGCAATCATGGGTTCCATGTTGATTGCATTGACATGTGGTTCCAATCACATTCTACTTGTCCCCTTTGTAGGACACTAGTTACTGAAAAACTCTCTAAGCTAAATAATAGCACTCCAAGTGTTCGAGAGAATGTCACAGAGAACAGTGAGTCATCATCAGAAGCTGAAAACTCTGCTGATGTGAATACCAATGATGAGTCTTCAAATTTTCCCACACATGTGTTGGTTTGGGGTGATCAAACACAATTTTCACACACTACTGAGGATCCACATTGCTCATCATCATCTGGTTCATGTTCTTCAAGCAGTGAGAGTGGAAGTGATAGTAGCACTAGTAGCAGCAGCAATGGAAGAAACAATAATGGAGTGTTGGTAATTGATATACCAAATGATGAGGTCACTCCTGAAGATGATGATGAGATGAAATCATCATCACCAATGGTAGCAAGATTGAGGTCAATCAAGAGGCTTCTAAGTAGGGACAAAAAGTCAACTAGTCCTTGTATTCCCAATTCTTTTGATGTGGAACAAGCATAG 942 0.4193 MSTKSDSGNMLNNSDAIVISGKIMVAVVVLLSFVFVFVLMLHLYSKFSMWRVQQETSIPSPQIRRGRRHRRRRHLVFASAEDAILHGIQNVGLDPSVLKSIPVLVFQPHEFKEDLECAVCISELVEGEKFRALPHCNHGFHVDCIDMWFQSHSTCPLCRTLVTEKLSKLNNSTPSVRENVTENSESSSEAENSADVNTNDESSNFPTHVLVWGDQTQFSHTTEDPHCSSSSGSCSSSSESGSDSSTSSSSNGRNNNGVLVIDIPNDEVTPEDDDEMKSSSPMVARLRSIKRLLSRDKKSTSPCIPNSFDVEQA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00594 313 CDD RING-H2_EL5-like 116 159 - -
Arst2g00594 313 SMART ring_2 117 158 IPR001841 -
Arst2g00594 313 PANTHER RING-H2 FINGER PROTEIN ATL16 23 282 IPR044600 GO:0016567|GO:0016740
Arst2g00594 313 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Arst2g00594 313 MobiDBLite consensus disorder prediction 220 282 - -
Arst2g00594 313 MobiDBLite consensus disorder prediction 171 206 - -
Arst2g00594 313 FunFam RING-H2 finger protein ATL3 86 164 - -
Arst2g00594 313 SUPERFAMILY RING/U-box 97 169 - -
Arst2g00594 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 165 IPR013083 -
Arst2g00594 313 Pfam Ring finger domain 116 159 IPR001841 -
Arst2g00594 313 MobiDBLite consensus disorder prediction 220 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00594 Arst-Chr2 6006522 6007666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00594 19 297 C3H Transcription Factor Family AT1G53820 40.203 5.73e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00594 - - gmx:100775523 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00594 2 6006522 6007666 Arst2g00594 2 6006522 6007666 ECH