Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00571 ATGATGGAGGATCGAAGGCTGGTGCTGGTTCTCATCAGCACCTGCATTCTCTGTTTCTTGGTCATTGGCATTAATGGTGACACAGATCCAAATGATGCTAATGCTCTAAGGAGCTTGTATCAGAATATGAACTCACCATCTCAACTAAATTGGCCTCAGAATGGCAATGATCCTTGTGGACAGTCTTGGAAAGGCATTAGTTGCAAGGACAATCGCGTCACTGAGATCAAGTTACCTGGTCTTCAACTTAGTGGAACTTTGGGTTACCAGCTCGAAAGCTTGACATCTGTGACTTACTTTGACTTGAGTAACAACAATCTTGGTGGCAGCTGGTACCAACTCCCTCCAAATTTGCAGCACCTAAACCTCGCTAATAATAATTTCAATGGGCCGATCCCATATTCGATCTCTCAAATTGCTTCGCTTAAATACCTGAATCTTGGTCACAACCAGTTCCAACAAGGATTGACTGTTGACTTTTCAAAGCTTACTTCCCTCTCTACACTGGATCTTTCGTCCAATTCGCTGACAGGGGATCTCCCTCAGACAATGAGCTCACTTTCGAGCTTGTCAACCTTGTATCTGCAAAACAACCAGTTCACGGGCACCATCGATGTTCTTGCTAACCTGCCACTTGACACTTTGAATGTGGAAAACAATCATTTTACAGGCTGGATACCGGAACAGCTGAATGGCATAGACCTACAAAAGGGTGGTAATTCATGGAGCTCGGGGCCTGCGCCCCCTCCACCTCCTGGGACACCTCCAGCAACAACCAGCCGTCACCACAAATCCGGTGGGCACGGCAGCTCATCAGGTGGTAGCTCTAGTGATGGGGGTAAAAAATCTGGTATTGGAGCCGGTGGCGTTGCTGGAATAGTGATCTCCATATTGGTTGTTGGGGCAATAGTAGCATTCTTCCTGGTGAAGAGAAGATCCAAGAAGTCGTCGTCATTAGACACGGAAAAGCTTGACAATCAGCCGTTGGCTCCTCTAGCTTCAAATGAAGTGCACGGATTGAATTCTATGCAGAGTTCCTCTGTGATTGACTTGAAAACATTTGACACTCCTGTGGAACCAATAAATGTTAAACCCCCTATTAAACCCCCACCTCTCAAATCATTCGACGAGGAAGAAATTCCAAAGAAGCCAACTGCTGTCAAGAAGACTGTCGCCGCTCCCGCAAATGTGAAAGCATATTCTATAGCTGACCTGCAGATTGCTACTTCAAGCTTCAGTGTGGATCAACTCCTTGGTGAGGGGTCTTTCGGACGTGTATACCGTGCACAATTCGATGATGGAAAGGTTCTTGCAGTAAAGAAGATAGATTCATCTATCATTCCCCATGATTCATCCAACGATTTTGTGGAAGTAGTCTCAAACATCTCCCATTTGCATCATCAAAATGTGACAGAGCTTGTTGGTTATTGTTCGGAGCATGGACAACACCTCTTGGTCTACGAGTTCCATAAAAATGGATCGCTGCATGACTTCCTTCACCTACCTGATGAGTACAGCAAACCATTGATATGGAACTCTCGTGTCAAGATCGCTCTAGGGACAGCTCGCGCCTTAGAGTACCTACATGAAGTTTGTTCGCCTTCGGTTGTTCATAAGGATATTAAGTCAACCAACATATTGCTTGATTCAGATCTTAACCCTCATCTTTCAGATTGTGGATTGGCAAGCTATATTCCAAATGCAGACCAGGTATTGAACAATAATGCTGGATCGGGATACGAAGCACCGGAAGTTGGTATGTCCGGTCAGTATACGCTTAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAACTTCTTAGTGGAAGGAAACCGTTTGACAGCTCAAGGCCAAGATACGAGCAGTCTTTGGTACGGTGGGCGACACCACAACTCCATGATATCGATGCATTGGCTAAAATGGTTGATCCTGCGCTGGAAGGGCTATACCCGGTTAAGTCGCTGTCCCGTTTTGCCGATGTTATCGCACTTTGTGTTCAGCCGGAGCCAGAATTCCGACCACCGATGTCGGAAGTGGTTCAAGCATTAGTTCGGTTAGTGCAGAGAGCAAACATGAGCAAAAGGACATTTGGGACTGAGCAAGGAGGAACACCAAGAGCGGGTGATGAGCCTGATACACCAGACATGTAA 2154 0.4605 MMEDRRLVLVLISTCILCFLVIGINGDTDPNDANALRSLYQNMNSPSQLNWPQNGNDPCGQSWKGISCKDNRVTEIKLPGLQLSGTLGYQLESLTSVTYFDLSNNNLGGSWYQLPPNLQHLNLANNNFNGPIPYSISQIASLKYLNLGHNQFQQGLTVDFSKLTSLSTLDLSSNSLTGDLPQTMSSLSSLSTLYLQNNQFTGTIDVLANLPLDTLNVENNHFTGWIPEQLNGIDLQKGGNSWSSGPAPPPPPGTPPATTSRHHKSGGHGSSSGGSSSDGGKKSGIGAGGVAGIVISILVVGAIVAFFLVKRRSKKSSSLDTEKLDNQPLAPLASNEVHGLNSMQSSSVIDLKTFDTPVEPINVKPPIKPPPLKSFDEEEIPKKPTAVKKTVAAPANVKAYSIADLQIATSSFSVDQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSIIPHDSSNDFVEVVSNISHLHHQNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKDIKSTNILLDSDLNPHLSDCGLASYIPNADQVLNNNAGSGYEAPEVGMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRYEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTEQGGTPRAGDEPDTPDM 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00571 717 MobiDBLite consensus disorder prediction 258 279 - -
Arst2g00571 717 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Arst2g00571 717 SUPERFAMILY Protein kinase-like (PK-like) 394 684 IPR011009 -
Arst2g00571 717 Pfam Protein tyrosine and serine/threonine kinase 414 684 IPR001245 GO:0004672|GO:0006468
Arst2g00571 717 Pfam Leucine Rich Repeat 117 136 IPR001611 GO:0005515
Arst2g00571 717 MobiDBLite consensus disorder prediction 695 717 - -
Arst2g00571 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Arst2g00571 717 Gene3D Ribonuclease Inhibitor 29 246 IPR032675 -
Arst2g00571 717 SMART serkin_6 412 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00571 717 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 688 IPR046959 -
Arst2g00571 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 253 - -
Arst2g00571 717 ProSiteProfiles Protein kinase domain profile. 412 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00571 717 Gene3D Phosphorylase Kinase; domain 1 376 489 - -
Arst2g00571 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 490 698 - -
Arst2g00571 717 SUPERFAMILY L domain-like 28 230 - -
Arst2g00571 717 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Arst2g00571 717 MobiDBLite consensus disorder prediction 236 281 - -
Arst2g00571 717 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 376 489 - -
Arst2g00571 717 CDD STKc_IRAK 418 687 - -
Arst2g00571 717 Pfam Leucine rich repeat 160 200 IPR001611 GO:0005515
Arst2g00571 717 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Arst2g00571 717 Gene3D Transferase(Phosphotransferase) domain 1 491 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00571 Arst-Chr2 5812966 5818811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00571 2 716 Strubbelig Receptor Gene Family AT1G53730 66.988 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Arst2g00571 PK_Tyr_Ser-Thr 5.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00571 - - gmx:100780323 1007.67