Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00556 ATGGCTTCTGCTTGTGCTTCCTCTGCCATTGCAGCTGTTGCCATCTCTTCCCCAAGTTCTCAGAAGAATGGATCACAGTTGGGAACCACAAAAGCTTCATTTCTTAGTGGAAGGAAGCTGAAGTTGAACAACTTCACAGCACCAACTACTGGAGCTAGATCCAGCACCACAGTGTGTGTAGCAGCTGATCCTGATAGGCCCCTTTGGTTCCCCGGCAGCACTCCTCCGCCTTGGCTCGATGGCAGTCTCCCCGGAGACTTTGGATTTGATCCTCTAGGACTTGGATCTGACCCAGAGAGCCTAAGATGGAATGTTCAAGCAGAGCTTGTGCACTGCAGATGGGCTATGTTAGGCGCCGCCGGCATCTTCATCCCGGAATTCCTAACTAAGATTGGGATCCTAAACACACCTTCATGGTATACTGCTGGGGAGCAAGAGTACTTCACAGACACCACCACACTCTTCATAGTTGAGCTCATCTTCATCGGCTGGGCCGAGGGACGAAGATGGGCTGATATCATCAAGCCAGGCTGTGTTAACACTGACCCTATCTTCCCTAACAACAAGCTCACCGGAACTGATGTAGGGTATCCCGGTGGCCTATGGTTTGACCCTCTCGGATGGGGTAGCGGTTCACCTGAGAAGATCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGAAGGTTGGCCATGTTGGCTGTTATGGGAGCATGGTTCCAGCACATTTACACCGGCACCGGCCCTATCGACAACCTCTTTGCACACCTTGCTGATCCTGGCCATGCTACTGTTTTCGCCGCTTTCACTCCCAAGTGA 816 0.5159 MASACASSAIAAVAISSPSSQKNGSQLGTTKASFLSGRKLKLNNFTAPTTGARSSTTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00556 271 FunFam Chlorophyll a-b binding protein, chloroplastic 76 261 - -
Arst2g00556 271 SUPERFAMILY Chlorophyll a-b binding protein 61 269 - -
Arst2g00556 271 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 269 IPR001344 GO:0009765|GO:0016020
Arst2g00556 271 Gene3D Chlorophyll a/b binding protein domain 76 261 - -
Arst2g00556 271 Pfam Chlorophyll A-B binding protein 75 241 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00556 Arst-Chr2 5684974 5687443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00556 46 271 Chloroplast and Mitochondria Gene Families AT3G61470 88.496 6.89e-152 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00556 K08908 - gmx:100784089 528.094