Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00551 ATGGCAGAAACTCGGGTTCTACCTGTTGGATATAGGTTTCGTCCAACAGAAGAGGAAATTTTAATTCACTATCTCAATAACAAGCATTTGGGAAATGATGCAGAGATTAAGAACACTATTTCCCAAGTTGATCTTTGTAACTTTGATCCTTGGGATTTACCAGAACAATCGAAAGTGAAATCGGATGATCAAGAATGGTTTTTCTTCAATGAATTGAAATACATGAAAAACAAGCGGTGTAACAGAAAAACCAACATGGGATATTGGAAGATCACAGGAAAAGAGAGAATCGGGACAGACAGTGTCATAGGTACAAAAAGAACACTAGTTTTCTACGAGCGTCCACATAATGTCAAAACCAATTGGGTTCTTCATGAATATCATGCATTTGATCAAAAGGTAGGTTCTTGCCAGAGCAACATCGTATTGAGCCGTGTAATAATGAATGCTGAGAAAAGGGAACAGAAGCTAAAGACAAAAGCAAGCAACATAGTCGAAGAGGAGGAAGTAAAATGTGAAGATGAACCATGCAGCGAAATTACTGACTGTGTTACCCAAGCAACTACAGAAGATGCAATCATTCCTGATAATGCATGTGTTTCATCCGAGCGACAACAACCTCAAGTTATAGATTATGAAATTCTCTCATCGGGACAACAATCTTCAGTGGCCCATTCCGGTAATGAAAACAATAATGCCGCGGAAGCAACATGGAGGCAAGATGCCGATATGAATATCGAGTATTTTTGGAATTTGCTGTTTTCTAGCATCGATGCTGACCCTCATGCTGAGTTCTTAAATTCGGTGTTGGCAGGGGATGATCAACTCTATGTTGATTCCGGCCACCATTGA 852 0.3967 MAETRVLPVGYRFRPTEEEILIHYLNNKHLGNDAEIKNTISQVDLCNFDPWDLPEQSKVKSDDQEWFFFNELKYMKNKRCNRKTNMGYWKITGKERIGTDSVIGTKRTLVFYERPHNVKTNWVLHEYHAFDQKVGSCQSNIVLSRVIMNAEKREQKLKTKASNIVEEEEVKCEDEPCSEITDCVTQATTEDAIIPDNACVSSERQQPQVIDYEILSSGQQSSVAHSGNENNNAAEATWRQDADMNIEYFWNLLFSSIDADPHAEFLNSVLAGDDQLYVDSGHH 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00551 283 Gene3D NAC domain 16 154 IPR036093 GO:0003677|GO:0006355
Arst2g00551 283 Coils Coil 147 167 - -
Arst2g00551 283 Pfam No apical meristem (NAM) protein 8 128 IPR003441 GO:0003677|GO:0006355
Arst2g00551 283 SUPERFAMILY NAC domain 4 147 IPR036093 GO:0003677|GO:0006355
Arst2g00551 283 ProSiteProfiles NAC domain profile. 7 149 IPR003441 GO:0003677|GO:0006355
Arst2g00551 283 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00551 Arst-Chr2 5584172 5588564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00551 6 147 NAC Transcription Factor Family AT1G33060 47.020 4.23e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst2g00551 NAM 5.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00551 - - aip:107626709 526.554