Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00538 ATGCATATTATTATTGGTTTAGAACTTCTTGTGTTCTTACCTTTTTCTTGTTCTCTTCAACCACCTAATTTGCTTCCAAATCCTTGCAATGAAACTTGTGGAAAACTCCATGTTCCTTTCCCATTCTTTGTCAACTCTTCTTGTGCCTCAATCTCAACTTCTTTCAACCTTTCTTGTTCAAACTCCTCTAACCTTTTCCTCAAAATTGATTCACAAAGTTACAAGGTTTTAGAGTTCTTCAATGATGGCTTGTTGGTGGACTTTCCAGGCGCATCGTCATCTTCGACTTGCCGAATGTACAATGACTTGAACTCATTTGGGAAAAGTTTTGAAGGAAAAGATGAAGATCAGTATGGAATCTCATTGGACAATGTTGTTGGACTCTATGACTGTGATGACTCCTCAGTATGCAAACCAGATTGTGAAACAATTGAGCTTCCAGGGTGTGATGGAAGTGGCAACAACCTTGGATGCTGTTATCCACTAAGTGATCATAGCATATGGCACAGTGGTGAAGGGTTCTCAGTGTTCTCTGAATTTGGATGCAGAGGGTTCTCAAGTTGGGCTGTTGTTAGAGGATCTAATTCAGGAAAACATGGGGTGAAGTTGGAATGGGGTGTTCCTTTGAAGAAGAATTCATCATTAATGGAGAAAGTTTGTGATTTGAATGCAGAAATGGTGAATGCCACTTCAGTTCAAGGTGCAGTTAGGTGTGTTTGTCAAGATGGATTTATTGGTGATGGTTTTCTTAATGGATCAGGATGCTTGCAGTCTTGTATGAAGAATGGACAGGAAGCATATGGAGACAACTGTTACATCAAAAAACATGATCAAAGGAAAATGCTCATCATTGTAGGAATCTTGGGTCCATTTCTCATTGTTGCTTCATTGATTGCACTATTCTATCTTCTCAAAAAACCAGCAACAAAGCCAGGAATGTTTGACACAGAGCAGGCCTATTACCACAGCATTTCGTTCCGAAAACCGAATCGAACTCGCCTGTTCAGCCACCATGATCTAGACAAAGCCACCAAAGGTTTTGAAGAAGGACAGAAGCTTATGAGTGGACCAGTTGGCTCGATTTTCGCCGGAGTTCTCGGCGACGGATCCCACATAGCAGTTCAGAAGCTAAAATGTGAGAATGAGAAGGACATAATCCAAGTTGTATCACAAATTGAGATTCTATCAAACATTGTGCATAGGAACATGGCTTGTGTTCTTGGATGTTGCATTGAATCTAGTTACACTCCTCTAGTGGTTTATGAGTACCCTGCTAATGGAACATTAGAGGAGCATTTGAATCATGAATTCAAAGGAAATAATGGAGTTGGTTTGGATTGGTATAGAAGATTGATCATAGCTACTGAAACAGCTTACATTCTTGCATTCTTGCACTATGAGAATTCCCCTCCAATTTTCCACAACAATCTAAAATCTAGCTGCATTTTCTTGGATGATGATCTCTCAGTCAAGATCGCAGGGTTCGGCCTACTCAATTCTAAATTCAAGTATGAATCTCATCACTTTTGCAAGAATGATGTCTATGACATGGGATTGCTTCTACTTGAGATCATCTCAGGCTCAAACTCGACTCACCAGAAGTCTCCGCCTACGTCGGCTTTGGAGAAAATAAGGGATGGGAAGCTAGAAGAGATTGTTGATCCTCTCCTTTCGTATCACGAGATGGCGCAGCTCCGGCGAGATCAGGTGCAGATTGTGGCAGACCTTGCAACAAGGTGTGTGCTATTTGGTGGAGATGGAAAGATTGGAATGGTTGATGTTGTAAGAGAATTGGTGCACATAACAAAACAGAGTGGTGATGCTGCCAATTTGGATTTCTTGGAGGAAACATTCTCAAATTCAAGCCTTCTTCAAATGATTTCAATGTCTCCTGATTCTATCATTATTCATTGA 1914 0.407 MHIIIGLELLVFLPFSCSLQPPNLLPNPCNETCGKLHVPFPFFVNSSCASISTSFNLSCSNSSNLFLKIDSQSYKVLEFFNDGLLVDFPGASSSSTCRMYNDLNSFGKSFEGKDEDQYGISLDNVVGLYDCDDSSVCKPDCETIELPGCDGSGNNLGCCYPLSDHSIWHSGEGFSVFSEFGCRGFSSWAVVRGSNSGKHGVKLEWGVPLKKNSSLMEKVCDLNAEMVNATSVQGAVRCVCQDGFIGDGFLNGSGCLQSCMKNGQEAYGDNCYIKKHDQRKMLIIVGILGPFLIVASLIALFYLLKKPATKPGMFDTEQAYYHSISFRKPNRTRLFSHHDLDKATKGFEEGQKLMSGPVGSIFAGVLGDGSHIAVQKLKCENEKDIIQVVSQIEILSNIVHRNMACVLGCCIESSYTPLVVYEYPANGTLEEHLNHEFKGNNGVGLDWYRRLIIATETAYILAFLHYENSPPIFHNNLKSSCIFLDDDLSVKIAGFGLLNSKFKYESHHFCKNDVYDMGLLLLEIISGSNSTHQKSPPTSALEKIRDGKLEEIVDPLLSYHEMAQLRRDQVQIVADLATRCVLFGGDGKIGMVDVVRELVHITKQSGDAANLDFLEETFSNSSLLQMISMSPDSIIIH 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00538 637 Gene3D Transferase(Phosphotransferase) domain 1 505 615 - -
Arst2g00538 637 Gene3D Transferase(Phosphotransferase) domain 1 425 504 - -
Arst2g00538 637 SUPERFAMILY Protein kinase-like (PK-like) 326 598 IPR011009 -
Arst2g00538 637 Gene3D Phosphorylase Kinase; domain 1 319 423 - -
Arst2g00538 637 Pfam Protein tyrosine and serine/threonine kinase 349 502 IPR001245 GO:0004672|GO:0006468
Arst2g00538 637 ProSiteProfiles Protein kinase domain profile. 347 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00538 637 Pfam Wall-associated receptor kinase galacturonan-binding 29 79 IPR025287 GO:0030247
Arst2g00538 637 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 634 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00538 Arst-Chr2 5465786 5468855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00538 28 601 Receptor kinase-like Gene Family AT2G23450 29.194 1.67e-59 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Arst2g00538 PK_Tyr_Ser-Thr 1.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00538 - - gmx:100779880 834.713