Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00535 ATGATGGACGCGTACTCCTCTGGAGAGGAAGTGGTTATTAAGACTAGGAAACCTTATACAATCACCAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAACCGATTTCTAGAAGCTTTGAAGCTCCATGGGCGGGCATGGCAGCGAATAGAAGAGCATATTGGAACAAAAACTGCCGTGCAGATCAGGAGCCATGCGCAGAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCAGGCAAAGGGTGTTCCAATTGGACAAGCTCTTGACATAGAAATCCCCCCTCCACGACCCAAAAGAAAACCGAGCAATCCTTATCCTCGGAAGACCAGTGCTGGTGCCGCATCATTGCATAGTGGAGCAAAGGATGGAAAACTCAGTTCTCTTGAATCTTCACATGCTAAACAAGCACTGGACTTGGAAAAGGAACCTGTTCCAGAGGAGTTACCATGTTCTTCGGTTTCTTCAGCAAACAAGAGTTCAATATCGTGGTCAGTGCCACTGCAAAATTCATGCGGCTTAAGGGAGATTATACCTTCAGTGAAAGAGGTAATAGCGAAAGATGGAACAAATAAATCTTTTGTTACTATTGAACTTGAAAATCGGAAGTTGGAGATAGATGATGGGAAGCAGACTAATGGAAACTCCAGTTTGGAGAATTCTGATACAGTGAAATTGGTTCAAAATGAAAAAACAGATGGTCTTAACTGTGAACTAACCATAGATGGGATACAAGGCAATCAGAATTATCCGAGACATGTTACTGTGCACGTTGTTGATGGGAAACTCGGAACAAGTACTGCAAATCCATCCCAAGATATGGTGTTTCAAGATTCTATGTTTCAGCCACTAGGAGGGATTAATGGGCAACCTAATCTTTTCACCAATTCAACCGCATCAAACACGAGCGAGAGCCAAAACAACACAGAGAGATCTTCTGTTCATCAATCATTTCTTCCTTACCCTCCCTTCATACAAAATAATCAAGGCGATTACCAATCATTTCTTCAAATGTCTTCCACATTTTCAAGTCTTATTGTGTCTACCTTGCTGCAAAACCCAGCAGCACATGCTGCCGCAAGTTTTGCAGCTACTTTCTGGCCCTGTGCAAATTCAGAAGCTTCAGCAGATTCTCCTACGTGCTCTCAAGGAGGTTTTCCACCCAGACAGAATGGCTCTCCTCCAAGTGTGGCGGCTATTGCAGCCGCCACTGTAGCTGCTGCAACTGCATGGTGGGCTGCCCATGGACTGCTTCCTCTGTGTGCTCCACTCCATACTGCTTTTGCTTGTCCTCCAACATCAATGCCTGCAGTTCCATCAATCAATACTGGTGAAGCACCAGCACCAGCACCAGCACCGGTACAAGAACCGGCACCAATACCAACATCAGAGACAGAACAAGAGAAGAATAGTCTGCAAAATCCTCCTCAGCAGGACCAGACACTTGATCCTGTATGCTCGGAAGCTCAACAAGCACAACAGTCACCTTCTAAGTCCCCAGTTGATATCTCATCAGATTCTGAGGAGAGTGGAGATGCCAAGTTACATGCTTCGCCGTCCAAGGCTACTGATCAAGAGTTGAACAAAGAAATATCCGAGCACATTGATTCCAACAAAGCAAAAGGTAGAAAACCAGTTGACCGATCCTCATGTGGTTCCAACACAACCTCTAGCAGCGAATTGGAGACTGATGCATTAGAGAAGGATGAGCAAGGGAAGGAAGAGCCTGAAACAGCTGATGCTAACAATTTAGCCATTGACTCTAGTAATCGTCGTAGTAGAAGTGTTAGCAACCTTACTGATTCTTGGAAAGAGGTCTCCGAGGAGGGGCGACTGGCCTTTCAGGCTCTCTTTGCCAGAGAGGTGTTGCCACAAAGCTTTTCGCCTCCGCCCGATTTGCTAAACAAGGATCAGGAAATGGACAGCATCAAGGATAACAAGCAAACCACAGATATCAAGGATGAAGGCCAAGACAGCAAGAAATGCAGTTCTATTTTCGAGGGTATTCAGAAAATGATGCCATGTATAGAGAATAATGAGGAAGAGGGACTGCTAACCATAGGACTTGGACAAGGAAAGCTCAAGACTCGTCGAACCGGCTTCAAACCTTACAAAAGATGTTCAATGGAGGCCAAGGAGAACAGGGTTGGAAGCACGGGGAACCAAGGTGAAGAGCAAGGGTCAAAGAGAATACGCTTAGAAGGGGAGGCTTCAACTTGA 2217 0.4556 MMDAYSSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAQAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTSAGAASLHSGAKDGKLSSLESSHAKQALDLEKEPVPEELPCSSVSSANKSSISWSVPLQNSCGLREIIPSVKEVIAKDGTNKSFVTIELENRKLEIDDGKQTNGNSSLENSDTVKLVQNEKTDGLNCELTIDGIQGNQNYPRHVTVHVVDGKLGTSTANPSQDMVFQDSMFQPLGGINGQPNLFTNSTASNTSESQNNTERSSVHQSFLPYPPFIQNNQGDYQSFLQMSSTFSSLIVSTLLQNPAAHAAASFAATFWPCANSEASADSPTCSQGGFPPRQNGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPTSMPAVPSINTGEAPAPAPAPVQEPAPIPTSETEQEKNSLQNPPQQDQTLDPVCSEAQQAQQSPSKSPVDISSDSEESGDAKLHASPSKATDQELNKEISEHIDSNKAKGRKPVDRSSCGSNTTSSSELETDALEKDEQGKEEPETADANNLAIDSSNRRSRSVSNLTDSWKEVSEEGRLAFQALFAREVLPQSFSPPPDLLNKDQEMDSIKDNKQTTDIKDEGQDSKKCSSIFEGIQKMMPCIENNEEEGLLTIGLGQGKLKTRRTGFKPYKRCSMEAKENRVGSTGNQGEEQGSKRIRLEGEAST 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00535 738 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Arst2g00535 738 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Arst2g00535 738 FunFam protein REVEILLE 6 isoform X1 27 75 - -
Arst2g00535 738 PANTHER SWI/SNF COMPLEX-RELATED 8 620 - -
Arst2g00535 738 MobiDBLite consensus disorder prediction 525 545 - -
Arst2g00535 738 MobiDBLite consensus disorder prediction 561 576 - -
Arst2g00535 738 MobiDBLite consensus disorder prediction 636 658 - -
Arst2g00535 738 CDD SANT 27 70 IPR001005 -
Arst2g00535 738 MobiDBLite consensus disorder prediction 439 604 - -
Arst2g00535 738 MobiDBLite consensus disorder prediction 710 738 - -
Arst2g00535 738 Gene3D - 27 74 - -
Arst2g00535 738 MobiDBLite consensus disorder prediction 291 319 - -
Arst2g00535 738 ProSiteProfiles SANT domain profile. 23 74 IPR017884 -
Arst2g00535 738 NCBIfam myb-like DNA-binding domain, SHAQKYF class 23 72 IPR006447 GO:0003677
Arst2g00535 738 MobiDBLite consensus disorder prediction 581 602 - -
Arst2g00535 738 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Arst2g00535 738 SMART sant 24 72 IPR001005 -
Arst2g00535 738 MobiDBLite consensus disorder prediction 84 157 - -
Arst2g00535 738 MobiDBLite consensus disorder prediction 459 503 - -
Arst2g00535 738 Pfam Myb-like DNA-binding domain 25 68 IPR001005 -
Arst2g00535 738 MobiDBLite consensus disorder prediction 623 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00535 Arst-Chr2 5453964 5460555 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst2g00535 Myb_DNA-binding 2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00535 K12133 - gmx:100101859 1049.65