Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00527 ATGATGGACGCGTACTCCTCTGGAGAGGAAGTGGTTATTAAGACTAGGAAACCTTATACAATCACCAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAACCGATTTCTAGAAGCTTTGAAGCTCCATGGGCGGGCATGGCAGCGAATAGAAGAGCATATTGGAACAAAAACTGCCGTGCAGATCAGGAGCCATGCGCAGAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCAGGCAAAGGGTGTTCCAATTGGACAAGCTCTTGACATAGAAATCCCCCCTCCACGACCCAAAAGAAAACCGAGCAATCCTTATCCTCGGAAGACCAGTGCTGGTGCCGCATCATTGCATAGTGGAGCAAAGGATGGAAAACTCAGTTCTCTTGAATCTTCACATGCTAAACAAGCACTGGACTTGGAAAAGGAACCTGTTCCAGAGAAACATAATGGAGACAAAGTGTCACATGTAAAAGAAAATAAGGATGAGAACTGCTCTAAAGTATTTGCTCTTCTCCAGGAGTTACCATGTTCTTCGGTTTCTTCAGCAAACAAGAGTTCAATATCGTGGTCAGTGCCACTGCAAAATTCATGCGGCTTAAGGGAGATTATACCTTCAGTGAAAGAGGTAATAGCGAAAGATGGAACAAATAAATCTTTTGTTACTATTGAACTTGAAAATCGGAAGTTGGAGATAGATGATGGGAAGCAGACTAATGGAAACTCCAGTTTGGAGAATTCTGATACAGTGAAATTGGTTCAAAATGAAAAAACAGATGGTCTTAACTGTGAACTAACCATAGATGGGATACAAGGCAATCAGAATTATCCGAGACATGTTACTGTGCACGTTGTTGATGGGAAACTCGGAACAAGTACTGCAAATCCATCCCAAGATATGGTGTTTCAAGATTCTATGTTTCAGCCACTAGGAGGGATTAATGGGCAACCTAATCTTTTCACCAATTCAACCGCATCAAACACGAGCGAGAGCCAAAACAACACAGAGAGATCTTCTGTTCATCAATCATTTCTTCCTTACCCTCCCTTCATACAAAATAATCAAGGCGATTACCAATCATTTCTTCAAATGTCTTCCACATTTTCAAGTCTTATTGTGTCTACCTTGCTGCAAAACCCAGCAGCACATGCTGCCGCAAGTTTTGCAGCTACTTTCTGGCCCTGTGCAAATTCAGAAGCTTCAGCAGATTCTCCTACGTGCTCTCAAGGAGGTTTTCCACCCAGACAGAATGGCTCTCCTCCAAGTGTGGCGGCTATTGCAGCCGCCACTGTAGCTGCTGCAACTGCATGGTGGGCTGCCCATGGACTGCTTCCTCTGTGTGCTCCACTCCATACTGCTTTTGCTTGTCCTCCAACATCAATGCCTGCAGTTCCATCAATCAATACTGGTGAAGCACCAGCACCAGCACCAGCACCGGTACAAGAACCGGCACCAATACCAACATCAGAGACAGAACAAGAGAAGAATAGTCTGCAAAATCCTCCTCAGCAGGACCAGACACTTGATCCTGTATGCTCGGAAGCTCAACAAGCACAACAGTCACCTTCTAAGTCCCCAGTTGATATCTCATCAGATTCTGAGGAGAGTGGAGATGCCAAGTTACATGCTTCGCCGTCCAAGGCTACTGATCAAGAGTTGAACAAAGAAATATCCGAGCACATTGATTCCAACAAAGCAAAAGGTAGAAAACCAGTTGACCGATCCTCATGTGGTTCCAACACAACCTCTAGCAGCGAATTGGAGACTGATGCATTAGAGAAGGATGAGCAAGGGAAGGAAGAGCCTGAAACAGCTGATGCTAACAATTTAGCCATTGACTCTAGTAATCGTCGTAGTAGAAGTGTTAGCAACCTTACTGATTCTTGGAAAGAGGTCTCCGAGGAGGCTCTCTTTGCCAGAGAGGTGTTGCCACAAAGCTTTTCGCCTCCGCCCGATTTGCTAAACAAGGATCAGGAAATGGACAGCATCAAGGATAACAAGCAAACCACAGATATCAAGGATGAAGGCCAAGACAGCAAGAAATGCAGTTCTATTTTCGAGGGTATTCAGAAAATGATGCCATGTATAGAGAATAATGAGGAAGAGGGACTGCTAACCATAGGACTTGGACAAGGAAAGCTCAAGACTCGTCGAACCGGCTTCAAACCTTACAAAAGATGTTCAATGGAGGCCAAGGAGAACAGGGTTGGAAGCACGGGGAACCAAGGTGAAGAGCAAGGGTCAAAGAGAATACGCTTAGAAGGGGAGGCTTCAACTTGA 2277 0.4502 MMDAYSSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAQAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTSAGAASLHSGAKDGKLSSLESSHAKQALDLEKEPVPEKHNGDKVSHVKENKDENCSKVFALLQELPCSSVSSANKSSISWSVPLQNSCGLREIIPSVKEVIAKDGTNKSFVTIELENRKLEIDDGKQTNGNSSLENSDTVKLVQNEKTDGLNCELTIDGIQGNQNYPRHVTVHVVDGKLGTSTANPSQDMVFQDSMFQPLGGINGQPNLFTNSTASNTSESQNNTERSSVHQSFLPYPPFIQNNQGDYQSFLQMSSTFSSLIVSTLLQNPAAHAAASFAATFWPCANSEASADSPTCSQGGFPPRQNGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPTSMPAVPSINTGEAPAPAPAPVQEPAPIPTSETEQEKNSLQNPPQQDQTLDPVCSEAQQAQQSPSKSPVDISSDSEESGDAKLHASPSKATDQELNKEISEHIDSNKAKGRKPVDRSSCGSNTTSSSELETDALEKDEQGKEEPETADANNLAIDSSNRRSRSVSNLTDSWKEVSEEALFAREVLPQSFSPPPDLLNKDQEMDSIKDNKQTTDIKDEGQDSKKCSSIFEGIQKMMPCIENNEEEGLLTIGLGQGKLKTRRTGFKPYKRCSMEAKENRVGSTGNQGEEQGSKRIRLEGEAST 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00527 758 MobiDBLite consensus disorder prediction 656 677 - -
Arst2g00527 758 NCBIfam myb-like DNA-binding domain, SHAQKYF class 23 72 IPR006447 GO:0003677
Arst2g00527 758 MobiDBLite consensus disorder prediction 485 529 - -
Arst2g00527 758 Pfam Myb-like DNA-binding domain 25 68 IPR001005 -
Arst2g00527 758 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Arst2g00527 758 MobiDBLite consensus disorder prediction 465 627 - -
Arst2g00527 758 MobiDBLite consensus disorder prediction 84 158 - -
Arst2g00527 758 MobiDBLite consensus disorder prediction 134 158 - -
Arst2g00527 758 CDD SANT 27 70 IPR001005 -
Arst2g00527 758 MobiDBLite consensus disorder prediction 640 677 - -
Arst2g00527 758 MobiDBLite consensus disorder prediction 730 758 - -
Arst2g00527 758 Gene3D - 27 74 - -
Arst2g00527 758 ProSiteProfiles SANT domain profile. 23 74 IPR017884 -
Arst2g00527 758 MobiDBLite consensus disorder prediction 587 602 - -
Arst2g00527 758 MobiDBLite consensus disorder prediction 551 571 - -
Arst2g00527 758 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Arst2g00527 758 PANTHER SWI/SNF COMPLEX-RELATED 8 605 - -
Arst2g00527 758 MobiDBLite consensus disorder prediction 317 345 - -
Arst2g00527 758 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Arst2g00527 758 SMART sant 24 72 IPR001005 -
Arst2g00527 758 FunFam protein REVEILLE 6 isoform X1 27 75 - -
Arst2g00527 758 MobiDBLite consensus disorder prediction 607 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00527 Arst-Chr2 5453961 5460555 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst2g00527 Myb_DNA-binding 2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00527 K12133 - gmx:100101859 1072.38