Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00520 ATGGCTCCATCATTAGAGAGCAATAAAAATGTTGTTATTGATGATGAATCCAATAAGAATCTTCTTAAAGAAGAAGAAGAAGATGGAATGCTTTTTGCAATGGACTTGGGGGTTTTAGTGGCGTTTCCAATGGCTGTTAAGACTGCATTTGAGCTTGGAATCTTTGACATAATAGCCAAAGGTGGTGAACATGCAAAGTTCTCATCTGAAGACATTGCATCACAGATTGGTAGCACAAATCCTAATGCACCATCAATGGTGGATCGTCTTCTTAGGCTACTCGCAAGTCATTTTTTGTTGTCTTGTTCATCACTTCCTCAAGTCACCAAAGATGAAGATGATCAAGAACATGGGCTTATTGCATCTCCTCAGAAGACTGTGTATAGTCTTACAGCTGCTTCCAAATATTTTGTAACTGATGATGATGGTGTCAATTTTGGACACACTTTGAGCTTGATTCTGGACAAGGTTGTCTTGGAAAGCTGGAGTGAACTGAAAGGAGCAATATTGGAAGGAGGTGTGCCATTTGTTAGGGTTAATGGGATGCACACATTTGAGTACCCAAGTGTGGATCCAAGGTTCAATGATGTTTTCAACAAAGCTATGATAAGCCACACAACCATAGTGATGAAGAGGGTTCTTGAGTCCTATGAAGGTTTCAACAACATTAACATATTATTATTATTCCTTTTTTATTTTTTATTGTTATTTTTTATATATATATTTTTTGTATATTTTGTAGGTGTGAAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAACGGCGGAGATGCCATTTTCATGAAGTGGATACTTCATGATTGGAGTGATGAACATTGCTTGAAGGTGTTGAAGAATTGCCATAAAGCCATTCCTGAAGATGGAAAAGTGATTGTTGTGGACACAATGGTTCCGGTATTGCCGGAGAATAAAACCGCCGCTAAGGTTGCTTTCAAAGCTGACTTATTGATGATGACTCAAAACATTGGAGGAAAAGAGAGAACCAAACATGACTTCATTCATTTGGCCACTCTTTCTGGATTTTCTTCCATCAAATTTGTATGCTCTGTCTCTGGATATTGGGTTATGGAGTTCTACAAGTAG 1107 0.3821 MAPSLESNKNVVIDDESNKNLLKEEEEDGMLFAMDLGVLVAFPMAVKTAFELGIFDIIAKGGEHAKFSSEDIASQIGSTNPNAPSMVDRLLRLLASHFLLSCSSLPQVTKDEDDQEHGLIASPQKTVYSLTAASKYFVTDDDGVNFGHTLSLILDKVVLESWSELKGAILEGGVPFVRVNGMHTFEYPSVDPRFNDVFNKAMISHTTIVMKRVLESYEGFNNINILLLFLFYFLLLFFIYIFFVYFVGVKHVGGDMFESVPNGGDAIFMKWILHDWSDEHCLKVLKNCHKAIPEDGKVIVVDTMVPVLPENKTAAKVAFKADLLMMTQNIGGKERTKHDFIHLATLSGFSSIKFVCSVSGYWVMEFYK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00520 368 PIRSF O-mtase 12 227 IPR016461 GO:0008168
Arst2g00520 368 PIRSF O-mtase 245 368 IPR016461 GO:0008168
Arst2g00520 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 248 367 IPR029063 -
Arst2g00520 368 Gene3D - 12 137 IPR036388 -
Arst2g00520 368 FunFam Caffeic acid 3-O-methyltransferase 13 137 - -
Arst2g00520 368 SUPERFAMILY "Winged helix" DNA-binding domain 24 140 IPR036390 -
Arst2g00520 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 368 IPR016461 GO:0008168
Arst2g00520 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 224 IPR029063 -
Arst2g00520 368 Pfam O-methyltransferase domain 162 226 IPR001077 GO:0008171
Arst2g00520 368 Pfam O-methyltransferase domain 248 350 IPR001077 GO:0008171
Arst2g00520 368 Gene3D Vaccinia Virus protein VP39 247 358 IPR029063 -
Arst2g00520 368 Gene3D Vaccinia Virus protein VP39 138 227 IPR029063 -
Arst2g00520 368 PANTHER O-METHYLTRANSFERASE 249 360 IPR016461 GO:0008168
Arst2g00520 368 Pfam Dimerisation domain 44 95 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00520 Arst-Chr2 5329599 5333446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00520 26 368 Monolignol Biosynthesis Gene Families AT5G54160 41.551 5.66e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00520 K13066 - adu:107473077 610.142