Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00510 ATGGAGAGCCTCCAAGGACCCCTCAATTCATGTTTCTTTGGTGAGTCACATTTGGAATTGAACTATTTAGAGCAACAAGGTTTGGTTTTGGATTCAGAATCAGCATTGAGGCTTGAAGAAGAAGAAGAAGAACAAGTCTTAATGATATCAAGCTTAGAAGATAACATGCCATTCCTTCAAATGCTTCAAAGTGTGGAATATTCTCCAAACTACTCATCACAACAACAATGCTTCTTCCCTTTCAAAGATCCAACAAACTTTCAAACTCTTCTAAGGCTTCAACACTTGAAAAACCATAACAACAACAACAACAACAATAATAATAATGTTCAAGAACTTGATCAAAAGAGTTGTGTCACACATGATGTCATGGTAGAGATGCAACAACAACAACAACAATCACATTCACCAGTGAAATCTGAGAGCTATGAGCTTCATCAACAACACCACCAAACTTCAGCCTCAGCTTCATGTTGTGTTGAGAATAATAATAACAACACCACACCAACAAAAGCTGTTACTGCTGCTATTGAGAAGTGTGGTGGAAGAGGAAATAGCAACACTCAAGAAGTGTGCCAGAAATCTCAACAGGTGGGAAGTGTTGCCACAACAACAACAAGGGAGAGGAAGAAGAGGAAGAGAACAAGGCCTGCAAAGAACAAAGAAGATGTGGAGAATCAAAGAATGACTCACATTGCTGTTGAAAGAAATAGAAGGCGCCAAATGAATGATCATCTCAGTGTTCTAAGGTCCCTCATGCCCCCTTCCTATATTCAAAGGGGTGACCAAGCTTCAATCATTGGAGGTGCAATTGATTTTGTGAAGGAATTAGAGCAATTGCTTCAATCCCTTGAAGCACAAAAAAGGATGAGAAGAAAGAACAATAATAATAGTAGTAACAAAAATGAAGATGCTATTGGTTTTGGTTCTTCCTCTAATTCTTCTTCAACAACAAATGGTGGTTATGATGGAATAATGAGATCATCAACAACATCATTATCATTATTATCCACTGAAGAAGGAAACTTTGGTGGTGGTGGTGGTGGTAATGGTGATGAATTAAAAGCTGAGAACAAATCAGAATCAGCAGAGATAGAAGTGATATTGATTCAAACACATGTGAACTTGAAGATTCAATGCAAAAGGAGGCATGGTCAATTGGTAAAAGCTATAGTTGCTTTGGAAGATCTTAGGCTATCAATTTTGCACCTCAACATTACTTCATCTTCTGATGATTCTGTACTCTACTCCCTCAATCTCAAGATTGAAGAAGGGTGTAGGCTAAGATCAGCAAATGAGATAGCTGAAGCAGTTCATCACATATTCAACTTCATTAATGGTTAG 1344 0.3795 MESLQGPLNSCFFGESHLELNYLEQQGLVLDSESALRLEEEEEEQVLMISSLEDNMPFLQMLQSVEYSPNYSSQQQCFFPFKDPTNFQTLLRLQHLKNHNNNNNNNNNNVQELDQKSCVTHDVMVEMQQQQQQSHSPVKSESYELHQQHHQTSASASCCVENNNNNTTPTKAVTAAIEKCGGRGNSNTQEVCQKSQQVGSVATTTTRERKKRKRTRPAKNKEDVENQRMTHIAVERNRRRQMNDHLSVLRSLMPPSYIQRGDQASIIGGAIDFVKELEQLLQSLEAQKRMRRKNNNNSSNKNEDAIGFGSSSNSSSTTNGGYDGIMRSSTTSLSLLSTEEGNFGGGGGGNGDELKAENKSESAEIEVILIQTHVNLKIQCKRRHGQLVKAIVALEDLRLSILHLNITSSSDDSVLYSLNLKIEEGCRLRSANEIAEAVHHIFNFING 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00510 447 SMART finulus 232 283 IPR011598 GO:0046983
Arst2g00510 447 MobiDBLite consensus disorder prediction 184 204 - -
Arst2g00510 447 CDD bHLH_AtFAMA_like 229 289 - -
Arst2g00510 447 MobiDBLite consensus disorder prediction 337 357 - -
Arst2g00510 447 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 226 293 IPR036638 GO:0046983
Arst2g00510 447 Coils Coil 93 116 - -
Arst2g00510 447 FunFam Basic helix-loop-helix transcription factor 217 292 - -
Arst2g00510 447 Pfam Helix-loop-helix DNA-binding domain 227 278 IPR011598 GO:0046983
Arst2g00510 447 MobiDBLite consensus disorder prediction 290 324 - -
Arst2g00510 447 MobiDBLite consensus disorder prediction 184 224 - -
Arst2g00510 447 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 226 277 IPR011598 GO:0046983
Arst2g00510 447 MobiDBLite consensus disorder prediction 299 324 - -
Arst2g00510 447 Gene3D - 217 295 IPR036638 GO:0046983
Arst2g00510 447 Coils Coil 274 297 - -
Arst2g00510 447 PANTHER TRANSCRIPTION FACTOR FAMA 124 442 IPR044283 GO:0003700|GO:0010052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00510 Arst-Chr2 5199184 5203326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00510 219 447 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 52.542 1.08e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst2g00510 HLH 4.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00510 - - adu:107473071 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00510 2 5199184 5203326 Arst2g00510 2 5199184 5203326 ECH