Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00496 ATGACCCCATTTTCATTTTCACCACCTTCTGGAAAAAAAGTGGCTGAAGAAAGAACTAAACACAAAGAAATAAATTTGCAAAGGAAAAGAAGAGTAAAGAGGGAACACATACGCCTTAAAGAAAAGGATATTATTTTTGCCTTTTGTTTAATTTTCTTGCTGTGTATTATTAATCACGTGCATCATATCTCCCAAAAATTAAAAGAAAAAAAATTATTCCAGATGATGGATTGTAACAACAATACAAGGAAACACAATGATTCAAGTTCTAACAAAATATTTGTTGGAGGGTTGGCTTGGGAGACTCAAAAGGAGACCCTGAGAAGATATTTTGAGCAATTTGGAGATATTATAGAGGCTGTTGTCATAACAGACAAGAACACTGGAAGGTCCAAGGGTTATGGCTTTGTCACATTCAAGGATCCAGAGGCAGCAAAGAAAGCATGCCAAAATCCATCTCCAATAATTGATGGGAGAAGGGCAAATTGTAATATTGCATCAACTGCTGCAAACAAGAAACACTCTTCACAAACTCCTCAACATGAAAGGTTTAAACCAGTGGCTGGAATATTGGCTTCACCTTCTCATCATCATTTTGTTCCTTCATCAACATTTTTCCATCAACCTAATGAACAATTCAGAATTCCTTATCCAACTTATAGATATAATGGATACTCACAAGAAACAATGGTCTCTATGAATTGTTATGCTATCTATGGAGGTCAACAATTCTCACCTTACTACCCTTCCAATAATGGGGCAATAGGGCCATTAGGGTTTATCCCTAATATTTACCCTTTGAATGCTCAATATGCACATAGATATCATAGTCATCAAGGTCATGGTTTTAGGGTTCAATATCCACAAATGATGCACATTCCAGTTTTACCCCCTAGAAGACCATATGGCTCACCTGGTATCTTGACTTTTCCTCCTTCAATGCCAACACCACCAATTAGTAACTCAGGTGAAAAAATATTTTGA 984 0.3638 MTPFSFSPPSGKKVAEERTKHKEINLQRKRRVKREHIRLKEKDIIFAFCLIFLLCIINHVHHISQKLKEKKLFQMMDCNNNTRKHNDSSSNKIFVGGLAWETQKETLRRYFEQFGDIIEAVVITDKNTGRSKGYGFVTFKDPEAAKKACQNPSPIIDGRRANCNIASTAANKKHSSQTPQHERFKPVAGILASPSHHHFVPSSTFFHQPNEQFRIPYPTYRYNGYSQETMVSMNCYAIYGGQQFSPYYPSNNGAIGPLGFIPNIYPLNAQYAHRYHSHQGHGFRVQYPQMMHIPVLPPRRPYGSPGILTFPPSMPTPPISNSGEKIF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00496 327 MobiDBLite consensus disorder prediction 1 21 - -
Arst2g00496 327 CDD RRM_RBM24_RBM38_like 92 166 - -
Arst2g00496 327 Gene3D - 58 182 IPR012677 -
Arst2g00496 327 SMART rrm1_1 92 164 IPR000504 GO:0003723
Arst2g00496 327 SUPERFAMILY RNA-binding domain, RBD 80 170 IPR035979 GO:0003676
Arst2g00496 327 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 151 IPR000504 GO:0003723
Arst2g00496 327 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 168 IPR000504 GO:0003723
Arst2g00496 327 PANTHER BOULE-RELATED 81 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00496 Arst-Chr2 5071745 5076152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00496 87 177 C2H2 Transcription Factor Family AT2G19380 41.758 1.73e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00496 - - adu:107473081 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00496 2 5071745 5076152 Arst2g00496 2 5071745 5076152 ECH