Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00480 ATGCCAGAAAGCATGAGTATATCAGTGAATGGACAATCTCAAGTTCCACCTGGATTCAGGTTCCATCCAACTGAGGAAGAACTCCTTCAATACTACTTAAGGAAGAAGGTCTCTTATGAGAAGATTGATCTTGATGTTATTCGTGACGTTGATCTCAACAAGCTTGAACCATGGGACATACAAGAGAAATGTAAGATAGGAACCACCCCACAAAATGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTACCCGACCGGAACCCGGACAAATAGAGCGACCGCGGCCGGGTTCTGGAAGGCCACCGGCCGCGACAAGGTGATATACAGCAACGGGAAGAGGATTGGAATGAGGAAGACGTTGGTATTCTACAAAGGAAGAGCCCCTCATGGCCAAAAATCTGATTGGATCATGCATGAATATAGGCTTGATGATAACACCACCAACGATGCCAATATTGTTTCAAATGTGATGGGAGATGCAGCACAAGAAGAAGGGTGGGTGGTGTGTAGAATATTCAAGAAGAAGAACCATCTAAAAACCCTAGATAGTCCTTTAACCTCTTCCATCTCCGGCGACGGAGGTAGGAGGAGCCACCACCACCACCACCTATTCGACTCGTGCGACGAGGGCGCCTTAGAGCAAATTCTCCAACAAATGGGAAGAGGTGGTGGTAGTGGTGGTTGCAAGGAAGAGATCAACAACTATGATCAATCTAATAACAACAACAACAACAACTATGGTGGATCATCATCGTTAACAACAAGGTATGCAAGACCTTTTGACACAATCAACAACAATGTTGATAGCAGGTTCTTGAAGCTCCCAAGCCTAGAGAGTCCAAAATCAACAAGCATGGATCATAATAATAATAACAACAACAATGATAATGATGATAGCAATGAAAATAATGGGTACCATCCTATTATTCCAGTTGAGATGGTAACTGAAAATGAAGGGTCATTCACATGTGACAATCCCAACAACATGTTTCATCATCACCATTTGGGTGGTGGCGGTGGTGGCAGCAGCGACGGCGGTGGCGGTCTTACAAATTGGGTAGCGCTAGATAGGCTTGTTGCTTCTCAGCTTAACGGTCAGACCGAAGCTTCTAGACAACTCTCTTGCTTCAATGATCCCACCATGGGGTATGGCACTGGAAATCATGATCTTCTATTTCCATCCGTCAGATCTACTTCATCGTTGACGTCATCGTCAGCGTCAATAAATCCAAGGGCTGTTATTAGTGCGGGTGCAGGTGCATACATTTCTCCAGGCGCACAGGATTATACCACCACAAGCGAGATTGACCTGTGGAACTTTGCTAGATCCACTTCTTCGTTGTTGTCATCCTCTGAGCCATTGTGCCACGTGTCAAACACGTCAGTGTAG 1392 0.4526 MPESMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTNDANIVSNVMGDAAQEEGWVVCRIFKKKNHLKTLDSPLTSSISGDGGRRSHHHHHLFDSCDEGALEQILQQMGRGGGSGGCKEEINNYDQSNNNNNNNYGGSSSLTTRYARPFDTINNNVDSRFLKLPSLESPKSTSMDHNNNNNNNDNDDSNENNGYHPIIPVEMVTENEGSFTCDNPNNMFHHHHLGGGGGGSSDGGGGLTNWVALDRLVASQLNGQTEASRQLSCFNDPTMGYGTGNHDLLFPSVRSTSSLTSSSASINPRAVISAGAGAYISPGAQDYTTTSEIDLWNFARSTSSLLSSSEPLCHVSNTSV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00480 463 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 282 - -
Arst2g00480 463 MobiDBLite consensus disorder prediction 220 251 - -
Arst2g00480 463 FunFam NAC domain-containing protein 24 179 - -
Arst2g00480 463 SUPERFAMILY NAC domain 10 175 IPR036093 GO:0003677|GO:0006355
Arst2g00480 463 MobiDBLite consensus disorder prediction 278 304 - -
Arst2g00480 463 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Arst2g00480 463 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Arst2g00480 463 MobiDBLite consensus disorder prediction 232 251 - -
Arst2g00480 463 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Arst2g00480 463 MobiDBLite consensus disorder prediction 278 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00480 Arst-Chr2 4880013 4882905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00480 1 462 NAC Transcription Factor Family AT2G46770 52.350 3.83e-135 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst2g00480 NAM 4.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00480 - - ahf:112734309 820.076