Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00477 ATGGGAAAGAAAGGAAGTAGTAGTAGTAGTTCATGGTTGACTGCAGTTAAAAGAGCATTCAGATCTCCAACAAAAGACATTGAAAACAAAAGAAGCAATAGAAGAAGAAGTGAAGAAAGCTTTGATCAAGAAGAAGAAGAAGATAAGAGAGAAAAGAAAAGATGGATTTTTAGAAAAGCTGTGAATCATGAAAGCAACAACAATAACAACACTAATCAACAAAACCCAACAAAGTTGAAGCATAATCATAATCAAAATCATCATAATCATGATGTGGCTGCAGCAGCAACAACTGCTACTACTAATAATTGTTCTACAACAACAAGTGGAGGATCAAGAAGTGAACAAGATCAGAAGCATGCTCTTGCAGTTGCTGTGGCAACAGCTGAAGCTGCCATGGCAACTGCTCAAGCTGCAGTTGAAGCTGCAAGGTTGAATAACCCTAATAATAATCCTACTAATAGTAATAATAATGGTGCTGCTAATTACCATCATCATCATGCTAGGGTGCATTATTCTGCTATAGTGATTCAAACAGCTTTTAGAGGATACTTGGCAAGAAGAGCACTAAGAGCATTAAAAGGGTTGGTGAAATTGCAAGCATTGGTAAGAGGACACAATGTAAGAAAACAAGCAAAGATGACACTAAGGTGCATGCAGGCACTTGTTAGGGTCCAAGCAAGGGTTCTTGATCAGAGAATAAGGTCTTCATCACATGATGGAAGCAGAAAATCCACATTCAGTGACACTGCTAGTGTTTGGGATCATTCCCGGTATCTTCAGGATATTTCTGATAGAAAATCACTATCAAGAGAAGGAAGCAGCATTGCAGATGATTGGGATGAACGTCCTCACACAGTTGAAGAAGTGAAAGCAATGTTGCAACAGAGAAAGGAAGCTGCCATGAAAAGGGATAAGTCCTTAACTCAAGCTTTTTCCCAGCAGATATGGAGGAATGGAAGAAAATCGTCAATTGGAAACGAAGATGAGCTTGAAGAAAGGCCTAAATGGCTCGACCGATGGATGGCCACGAAGCCTTGGGAGACAAGGGGAAGAGCTTCAACTGACCAAAGAGATCCAATTAAGACAGTGGAAATTGACACCTCGCAGCCTTACTCGTACCTTGGAACCAATTACAGGAGATCACATCCAAACTATCAATATAACCCTCACCACCATCAACCTCAAAGGCATTCCATCGCTTCACCGCTACATAGATCACACCAAAATGGATCCCTTCACCCCTCAACTGCAACACCATCCCCAGCAAAATCTAGGTCGATACAAGTCCGGTCTGCGAGCCCTCGGTGTGTTAGAGATGATAGAAGCTACCACACTTCTCAGACACCAAGTTTGAGGTCTAATTATCATTACACCGGTAGCTTGTGTCAAAATGGCGGTCGATCCGGAACAAGCAGTGGTGGTAGTGGTACATTGCCTAATTACATGGCAGCAACCGAGTCTGCGAAGGCTAGGATTCGGTCACAGAGTGCGCCAAGACAAAGGCCGTCCACGCCAGAGAGGGACAGAGTTGGTGGTGCAAAGAAAAGGCTCTCTTTTCCTGTTCCTCCTGATCCATATAATGTAGGAATAGGGTATGGAAATTATGGGCATAGTTTGAGGAGTCCAAGTTTCAAGAGCGTAAGTGCTTCACATTTTGGGTTGGAACAACAATCCAATTACTCTTCTTGCTGCACTGAGAGTCTTGGTGGTGAGGTTTCTCCTTCTTCAACTAGTGATCTTAGAAGGTGGTTGAGGTAA 1761 0.4265 MGKKGSSSSSSWLTAVKRAFRSPTKDIENKRSNRRRSEESFDQEEEEDKREKKRWIFRKAVNHESNNNNNTNQQNPTKLKHNHNQNHHNHDVAAAATTATTNNCSTTTSGGSRSEQDQKHALAVAVATAEAAMATAQAAVEAARLNNPNNNPTNSNNNGAANYHHHHARVHYSAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSSHDGSRKSTFSDTASVWDHSRYLQDISDRKSLSREGSSIADDWDERPHTVEEVKAMLQQRKEAAMKRDKSLTQAFSQQIWRNGRKSSIGNEDELEERPKWLDRWMATKPWETRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPHHHQPQRHSIASPLHRSHQNGSLHPSTATPSPAKSRSIQVRSASPRCVRDDRSYHTSQTPSLRSNYHYTGSLCQNGGRSGTSSGGSGTLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGGAKKRLSFPVPPDPYNVGIGYGNYGHSLRSPSFKSVSASHFGLEQQSNYSSCCTESLGGEVSPSSTSDLRRWLR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00477 586 Pfam IQ calmodulin-binding motif 173 191 IPR000048 GO:0005515
Arst2g00477 586 Pfam IQ calmodulin-binding motif 197 213 IPR000048 GO:0005515
Arst2g00477 586 MobiDBLite consensus disorder prediction 444 483 - -
Arst2g00477 586 MobiDBLite consensus disorder prediction 1 17 - -
Arst2g00477 586 MobiDBLite consensus disorder prediction 61 80 - -
Arst2g00477 586 MobiDBLite consensus disorder prediction 563 586 - -
Arst2g00477 586 MobiDBLite consensus disorder prediction 364 432 - -
Arst2g00477 586 FunFam IQ-domain 11 169 220 - -
Arst2g00477 586 ProSiteProfiles IQ motif profile. 171 198 IPR000048 GO:0005515
Arst2g00477 586 PANTHER IQ-DOMAIN 5-RELATED 1 521 - -
Arst2g00477 586 MobiDBLite consensus disorder prediction 1 85 - -
Arst2g00477 586 ProSiteProfiles IQ motif profile. 194 221 IPR000048 GO:0005515
Arst2g00477 586 MobiDBLite consensus disorder prediction 348 521 - -
Arst2g00477 586 Coils Coil 27 47 - -
Arst2g00477 586 SMART iq_5 169 191 IPR000048 GO:0005515
Arst2g00477 586 SMART iq_5 192 213 IPR000048 GO:0005515
Arst2g00477 586 MobiDBLite consensus disorder prediction 21 60 - -
Arst2g00477 586 Gene3D - 167 221 - -
Arst2g00477 586 Coils Coil 126 146 - -
Arst2g00477 586 MobiDBLite consensus disorder prediction 348 363 - -
Arst2g00477 586 Pfam Protein of unknown function (DUF4005) 434 535 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00477 Arst-Chr2 4817416 4820483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00477 12 586 IQD Protein Family AT4G00820 54.975 1.07e-180 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00477 - - adu:107472901 1005.74