Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00462 ATGGGGCAGTGCTACGGCAAGACTAATCCCTCGCCGGAAACTGACGCCGCCGCGATTCCCAGCTCCGACGACCTTCCTCCGCCGTCAGTCACGCCCTCGGTGAAGAACACTCCGGCGAGAGCTTTATTGTCGCCGTGGCGGAGCCCTTACCCTCACGGAGGTGGCGTGACACCGTCTCCGGCTAGGACAGCGACGCCGAGGAGGATTTTCCGGCGGCCTTTTCCACCTCCGTCTCCCGCGAAGCATATTCGTGCGTCGTTGGCGAAGCGACTGGGGCGAGGCGCGGTGGCGGCGAGGGCAAAGGAGGGGACTATACCGGAGGAGGGAGTGGCGGCGGCGGAGGAAGAGGAGGAGGTGCTGGATAAGAGGTTTGGATATGGAAAGAATTTTGGTGCAAAGTATGAGATTGGGAAGGAAATTGGGAAAGGGCATTTTGGTCATACTTGTTATGCAAGGTGTAAGAAAGGTGAATTCAAGGACCAAGCTGTAGCAGTTAAAATCATTTCCAAGTCTAAGATGACGACAGCGATAGCAATAGAAGATGTTCGGAGAGAGGTGAAGATCTTAAAAGCTCTATCTGGCCATAAGCATCTGATCAAATTTCATGATGCTTTTGAGGATGCCAACAATGTGTACATAGTAATGGACATTGTAACAAATGGCCTCGGGGAGCTTCTTGACAGGATTTTGTCAAGGGGAGGAAAGTATCCGGAGGAGGATGCCAAAGCTATAGTTTTGCAGATTCTAAGCGTAGTTGCTTTTTGTCATCTTCAGGGCGTCGTGCACCGTGACCTAAAACCGGAGAATTTCCTCTTTACTTCAAAAAGTGAAGATGCTGATATGAAGCTTATTGATTTCGGTTTATCGGATTTCATCCGGACAGACGAACGACTAAATGACATTGTTGGGAGTGCATATTATGTTGCACCAGAGGTACTTCACAGGTCATATAGTGTGGAAGCAGATATATGGAGTATCGGTGTGATTACATATATCTTGTTATGTGGAAGTCGACCATTCTGGGCACGAACAGAATCTGGAATTTTCCGTTCAGTGCTCAGAGCTGATCCTAACTTCGAAGATTTACCTTGGCCTTCTGTGTCTGCGGAGGCCAAGGACTTTGTAAAGAGGCTCCTAAACAAGGACTACAGGAAAAGAATGACGGCCGTCCAAGCTCTAACTCACCCTTGGTTGAGGGATGAAAACCGCGTCATCCCTCTCGATATATTAGTTTATAAACTAGTGAAGTCCTATATACATGCAACACCATTCAGACGAGCAGCATTAAAGGCTCTTTCAAAGGCTTTGACAGAAGACGAATTTCCCTATCTTAGAGCGCAATTCAAATTGTTGGAACCAAATCGAGACGGCCACGTATTACTCGACAATTTCAAAATGGCCCTTATACGCCATGCAACCGATGCCATGAGGGAGTCAAAGGTTCTTGATATTATACACGCGATGGAACCACTTGCATACAGAAAGATGGACTTTGAAGAATTCTGTGCAGCTGCAGTTAGCATATATCAATTGGAATCACTTGAAAAGTGGGAAGATATTGCTTCAAATGCTTTTGAGCACTTTGAGAGAGAGGGTAACCGTGTAATTTCAGTTGAAGAATTAGCAAGAGTAAGTGCTATTTCATTCTTTTCTTATACTAATCTTCTAACGTTTTTCCAACCTTGTTAA 1689 0.4654 MGQCYGKTNPSPETDAAAIPSSDDLPPPSVTPSVKNTPARALLSPWRSPYPHGGGVTPSPARTATPRRIFRRPFPPPSPAKHIRASLAKRLGRGAVAARAKEGTIPEEGVAAAEEEEEVLDKRFGYGKNFGAKYEIGKEIGKGHFGHTCYARCKKGEFKDQAVAVKIISKSKMTTAIAIEDVRREVKILKALSGHKHLIKFHDAFEDANNVYIVMDIVTNGLGELLDRILSRGGKYPEEDAKAIVLQILSVVAFCHLQGVVHRDLKPENFLFTSKSEDADMKLIDFGLSDFIRTDERLNDIVGSAYYVAPEVLHRSYSVEADIWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFEDLPWPSVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDENRVIPLDILVYKLVKSYIHATPFRRAALKALSKALTEDEFPYLRAQFKLLEPNRDGHVLLDNFKMALIRHATDAMRESKVLDIIHAMEPLAYRKMDFEEFCAAAVSIYQLESLEKWEDIASNAFEHFEREGNRVISVEELARVSAISFFSYTNLLTFFQPC 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00462 562 SMART serkin_6 134 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00462 562 SUPERFAMILY EF-hand 428 544 IPR011992 -
Arst2g00462 562 FunFam Calcium-dependent protein kinase SK5 308 403 - -
Arst2g00462 562 Gene3D Transferase(Phosphotransferase) domain 1 222 414 - -
Arst2g00462 562 MobiDBLite consensus disorder prediction 1 81 - -
Arst2g00462 562 FunFam CDPK-related kinase 1 434 506 - -
Arst2g00462 562 MobiDBLite consensus disorder prediction 1 16 - -
Arst2g00462 562 FunFam CDPK-related kinase 1 127 222 - -
Arst2g00462 562 Gene3D Phosphorylase Kinase; domain 1 130 220 - -
Arst2g00462 562 SUPERFAMILY Protein kinase-like (PK-like) 125 421 IPR011009 -
Arst2g00462 562 Gene3D - 416 506 - -
Arst2g00462 562 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Arst2g00462 562 ProSiteProfiles Protein kinase domain profile. 134 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00462 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Arst2g00462 562 FunFam CDPK-related kinase 3 126 300 - -
Arst2g00462 562 CDD STKc_CAMK 133 397 - -
Arst2g00462 562 PANTHER SERINE/THREONINE-PROTEIN KINASE 120 543 - -
Arst2g00462 562 Pfam Protein kinase domain 134 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00462 562 Gene3D - 422 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00462 Arst-Chr2 4525806 4530200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00462 33 542 EF-hand Containing Proteins AT3G50530 58.364 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Arst2g00462 Pkinase 1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00462 K13412 - gmx:100796256 848.966