LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst2g00453	ATGGCACAACCAGGATGGCTTGAAAATTTTGATTTGGCCTCGGCTCAAAAAAGATACCAAATCCTTGCTACTATGCTTATTGTTGGACTTCAATTCGCTTGCGCCTTTGGAAACTTTAGTGTTCTTGCCTTCGTACCCTTGAGAGATCCTATCGAACCAGGTTCTTATCATCCTCGACTTGTACTTTTGTTTAACTTAGTAGGATCTGTTGCATCTGGGATTTTCAGTGATAAGTTTGGAAGAAAAATGGCTTTCGATATCATTCTCATGGTGCTCATGGCGGTCTGTTTCTTATATTTTTCTGGTATAGTGGTCTCTTTTATGTTCTTTATAGTCATTATTGCTTTTCTTGGGGGTGCTACATCCACCGTTGGCGCGATATTCATTTCCGAAACGATGGCAAACAAAATGAACCGCGGAAGCCTCATTGCAAGGCAATTTCTTGGAGAACTGTTTGGCCAGTTAGTTTCCATGATAACGATAATCATCTCATCTTCATCTGTCAGCCAGAAATACAAGGACTACTACTTTACTTTCAACAACCGCTGGATGTCTGTGGTAGTGGCAACGGCGACCATGATGGTGGCCGGGTATACGTACCTCTTCTGGGTTAAGAGGATACCTGAGAGCCCTCGCTACACATACTTTGTTTGGAACAACTCAAGAAAGGCTGCTTCAGACGCGAAGAGGCTACTAATTCGTGAAGTAACAAACGGAGAGGAGGAAGAAGCTACTGTTTTGCAAAACCTAACCTTTGGTTTATTTAGCTGGGAATTTTATAATCTCCATGGCTGGCACTTGTTGGGAGTCACCGCTACTTCTTTTGTAAACGGCATTAACTACCTCACTCAGCTGTTATTTCTAAACTTGATTTTCCACCAGTATGCTTTGTTGGTCCCTCCTTCTAAACCGGAATTGCTTTTGTTTTTGGCTATGCTGATGACTGTGACTACTGTTCTTGGCTTCTTGTGCCAGGTTTTCTTAATTGATCGCATCAACCGTTTCTGTATCCTGTTTGCATGTTTCTGCATCAAGGCTGTGTTAATGGTACTTGTTCTACTAGAAACTCCATGGAAGAAGAAAGATAACATCACCGAGCTTTGTGTGTATTATGTTCTTTGCAACATCATCTACAATTTTGCAAATGCAACTAATTTCGTTGTGGCTGCCGAGATCTTTCCAACAAGGATGAGGGGAACTTGCCATGGTATAACAGTTGCTGGTTTTCTTGCTTGCATCAATGTGATTCCTGGAATTGCGGCGTCCTTCTTGGTGAAGGAATCAAAGGGGAAAACCCTAGAAGATGCGAGCAACGAGCACGGATTAGAGTAA	1332	0.4234	MAQPGWLENFDLASAQKRYQILATMLIVGLQFACAFGNFSVLAFVPLRDPIEPGSYHPRLVLLFNLVGSVASGIFSDKFGRKMAFDIILMVLMAVCFLYFSGIVVSFMFFIVIIAFLGGATSTVGAIFISETMANKMNRGSLIARQFLGELFGQLVSMITIIISSSSVSQKYKDYYFTFNNRWMSVVVATATMMVAGYTYLFWVKRIPESPRYTYFVWNNSRKAASDAKRLLIREVTNGEEEEATVLQNLTFGLFSWEFYNLHGWHLLGVTATSFVNGINYLTQLLFLNLIFHQYALLVPPSKPELLLFLAMLMTVTTVLGFLCQVFLIDRINRFCILFACFCIKAVLMVLVLLETPWKKKDNITELCVYYVLCNIIYNFANATNFVVAAEIFPTRMRGTCHGITVAGFLACINVIPGIAASFLVKESKGKTLEDASNEHGLE	443

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst2g00453	443	SUPERFAMILY	MFS general substrate transporter	18	436	IPR036259	-
	Arst2g00453	443	Gene3D	MFS general substrate transporter like domains	51	238	IPR036259	-
	Arst2g00453	443	Gene3D	MFS general substrate transporter like domains	244	442	IPR036259	-
	Arst2g00453	443	Pfam	Sugar (and other) transporter	64	429	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Arst2g00453	443	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	38	408	-	-
	Arst2g00453	443	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	1	443	IPR020846	GO:0022857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst2g00453	Arst-Chr2	4293154	4295111	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst2g00453	52	439	Inorganic Solute Cotransporters	AT2G32830	31.183	6.60e-43	157

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst2g00453	K08176		-	sly:101251622	158.688