LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst2g00435	ATGGCTGAAGTTGTTTCTAGTGTGGCATCAACACTCTTGACCAATTTAGCAACAAAATCGTTCCAAGAGATTATTCTAGCATATGGTCTTAAAGATGAAATAAAAAAGTTTGAAAGTTCTTTGAGAACCATCGTTGCATATCTCATAGATGCTGAGAACAAGCAAGCAAAAAACCACAGTATAGATGAGTGGTTGAAGCAACTCAGAGAAGCATTTGATGATGCTGGTGACATACTAGACGAAATAGAGTATGAAGCAAAACGTAATGAAGTGGTCAAAATATATGGAAGCATTAGCATAAAGGTCCGTCGATTCTTCTCATACACAAGTAATCCACTCGCATTTCGCATCAAGATGGTCCACAAAATCAAAGATATGAAACAGAAAATGGATGAAAAAATAAAAGAAGGGAGAAACTTGGGTATAATTGAACAACATGTCAACACTCCAGCTCTGGAGCATAATTTACCATGGCGAGAAACTGCTTCTTCATTGTCTTTCCGTGTGTGTGGTAGACTTGAAGAGAAAGAAGAGATTATAAATTCATTGATGACACAAAAATTAGAAGCTAACAGTATTGATGTGATCTCAATTGTTGGGATTGGAGGTTTGGGAAAGACTACACTTGCACAAATGGTTTACAATGATACCCAAGTGAAGGCGAATTTCGATACTTTAATGTGGGTTTGTGTTTCTGACGATTTTGATGTGAAGAAGCTAATACAAAAAATTATTCATGCGGCCTCAAAGAGAGAGAATGTGGTGGATGCAAATTCTAGTTTGGAATATATGATATCTCTTCTCAATCAAAATTTACATGGTAAGAAATTCTTACTCGTGTTAGACGATGTTTGGAATGAAAACCACAACAAATGGGATGAATTGAGAACTCATTTGTTAGAAGCAGCTGGTGACAAAAACAGCAAAATTATAGTGACCACTCGTAGCCAAAAAGTTGTTGACATTGTGGGAAGTAATCTTGTAATGAAATTAGAAGGACTTCCTGAGAATGAATGTTGGCGGCTGTTTGTAAAATGTGCATTCCAAGAAGAGAAGGAAGAAGAGAAGTACCCAAGGCTAAAGCAAATTGAGGAGCAAATTGTTAAAAGATGCAAAGGAGTACCCTTGGCTATAACAACTTTGGGTTGCTTGCTTAGATCAAAATGCCATGATGAAAATGAGTGGAGAAAAATAAGGGATAGTGAGGTGTGGAATCTCAATCAAGAAGAAACTGACATTTTGCCATCAGTCAAATCGAGTTACAATCACTTGCCACCACAAGTAAAGCAATGTTTTTCATACTGCTCTTGTTTTCCAAAGGATTACGACTTTCATGTTATTGAGTTGATTATGTTCTGA	1359	0.3664	MAEVVSSVASTLLTNLATKSFQEIILAYGLKDEIKKFESSLRTIVAYLIDAENKQAKNHSIDEWLKQLREAFDDAGDILDEIEYEAKRNEVVKIYGSISIKVRRFFSYTSNPLAFRIKMVHKIKDMKQKMDEKIKEGRNLGIIEQHVNTPALEHNLPWRETASSLSFRVCGRLEEKEEIINSLMTQKLEANSIDVISIVGIGGLGKTTLAQMVYNDTQVKANFDTLMWVCVSDDFDVKKLIQKIIHAASKRENVVDANSSLEYMISLLNQNLHGKKFLLVLDDVWNENHNKWDELRTHLLEAAGDKNSKIIVTTRSQKVVDIVGSNLVMKLEGLPENECWRLFVKCAFQEEKEEEKYPRLKQIEEQIVKRCKGVPLAITTLGCLLRSKCHDENEWRKIRDSEVWNLNQEETDILPSVKSSYNHLPPQVKQCFSYCSCFPKDYDFHVIELIMF	452

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst2g00435	452	PRINTS	Disease resistance protein signature	271	285	-	-
	Arst2g00435	452	PRINTS	Disease resistance protein signature	195	210	-	-
	Arst2g00435	452	PRINTS	Disease resistance protein signature	371	385	-	-
	Arst2g00435	452	Gene3D	-	155	328	IPR027417	-
	Arst2g00435	452	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	158	435	IPR027417	-
	Arst2g00435	452	Gene3D	-	5	129	-	-
	Arst2g00435	452	Gene3D	-	333	420	IPR042197	-
	Arst2g00435	452	Pfam	Rx N-terminal domain	9	96	IPR041118	-
	Arst2g00435	452	Pfam	NB-ARC domain	176	422	IPR002182	GO:0043531
	Arst2g00435	452	FunFam	Probable disease resistance protein At1g61300	156	326	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst2g00435	Arst-Chr2	4087042	4092192	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst2g00435	169	452	WRKY Transcription Factor Family	AT5G45050	27.632	1.80e-12	67.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst2g00435	-		-	adu:107473007	894.419

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