Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00372 ATGATCACTGATGTACCTTCTTCTTCTTCCTCTCCCTCTCCCACCGTCAAGACCCGTAGATGGATCAACCATGTATTCATCAGTTTCAGGGGTGAAGACACCAGAAAAGGCTTCACAGATCACCTTTATGCTGCACTGGAAAGAAGGGGTTGTATCAAAACTTTCAAGGATGATCATGACCTTGAGAGTGGGGAAATCATATCTGAAGGGCTCATCAAGGGAATTCAAGAGTCCATGTTTGCGCTTGTTGTCCTCTCACCAAACTATGCTTCCTCAAGATGGTGCTTGGATGAGCTGCAAAACATCATTGAGTGCAGGGAAAAGTTTAACCAAGTGGTTTTTCCTATCTTCTATGGTGTAGAATCCTCTGATGTAAGGTATCAGAGAGGAACCTTTGAAGAAGCTTTCAGAAAACATGAAGAGAGGTTCAAGGAAGAGAAGGGGAAAGTCGAAAGATGGAGAGATGCATTGCAAAAAGTTGCAAGTTATTCCGGTTGGGACTCCAAAGATAGGTGCTCAAAAACCGATAAGCATCTGCTAATGACACATGACGTGCATCAGACTTGTGAGCTTGAAGGCTTAGTTCAGGAAGAAGCCCTTCATTTATTGTGTCTGAAAGCTTTTAAACAAGATCAACCCAAAAGCCAATATCAGAATTTGTGCAGCAAAGTGGTTCAATACACAAGAGGCCTTCCATTGGCACTTGAAGTATTGGGATCCCATCTTTGTGGAAGAACTCCTGAGGCTTGGGATAGTGCTTTAAAGCAATTAAGAAGTTCTCCACACCCTGAAATCCAAAATTCATTGAAAATAAGTTTTGAAAGTTTGGCTAGCACAGAGAGAGAAATGTTTTTGGATATTGCTTGTTTCTTCAAAGGCATGAACAAGGATGAAGTAGTAAAAGTGTTAGAAAATTGTGGTCATTTTCCACAAATTGGAATTGAAATTTTGATTGAAAAATCTTTCGTCACTCTTGGTTGGGGTAATAAATTGGAAATGCATGATTTACTTGAAGAAATGGGAAAGAATATAGTGTTTCAAGAATCTCCAAATGATCCAGGAAAACGTAGTAGATTGTGGTCTCATGATGACATCAGCCGTGTGTTGACACAAAATAAGGGAACTGAAGCAATTCAAGCAATAGTACACTATACTCGAGAAAATGAAGCAAGATGGAGCTCTGAAGCTTTCTCCAAGACCAGCAACATAAGGTTGCTAAAGATACGTAATCCGTGTCGTCTTTCCCATGGCCTTGATTGCCTTCCTTATGCACTCAGAGTTCTTGACTGGCTAGGATGCCCTCTGAAAACTCTGCCACTTACTGATCAGCTGGATGTTGTTGACATCAATTTGTCTTGGAGCAAAATTAAACAACTTTGGCACGGAAAAAAGATTTTACATAAGTTGAAGTGCATCAACTTGAGTTTTTCCCAGAACCTTAACCAAACCCCTGACTTTGTGGAGGTTCCGAATCTCGAATCGTTAGATCTTGGAGGCTGTAAAAGGTTAACCAAAATCCATTCATCTGTTATGCACCTCAAGAAACTTGTTCAATTGAACTTAGAAGGCTGCAAAAGGCTCAAAGCTCTTCCAGGTAAAATGGAGATGAGTTCATTAAAGGTTTTAAATCTTTCTGGTTGCTCAAACATGAACACCATCCCAGACTTTGGGAATTGCATGGGACATCTAGAAGAGCTTCGTTTGGATGGAACTGCTGTAACAGAGCTACCTTCATCATTAGGATGTCTGGTTGGACTTGTTCTTTTGCATTTACAGAATTGCAGGTATCTTGTTTGCCTTCCGGATACCATTCATAAGTTGAAGTCCCTCAAAGTTCTTAATGTTTCTTATTGCTCGAAACTCCGTAGCTTGCCAGAGTGCCTACAGGAAATGAATAATCTGGAAGTACTTTATGCAATCAATACTGCCATTGAAGAACTACCTTTATTTTTATGTTATCTAGAAAACATCAAAGTAGTGTCATTTGCTGGTTGCAAAGAGTCAACATCCGTGTTAAATTGCTTTCGAGTTCCATCTGCTGTTTGCCGTCCATCCCTTTTGATAAGGTTAGATTTAAGTTATTGCAATCTACTTGCTGAATCAATACCAGATGGTTTTTGTGGCATATCGCTGAGGGATTTGGATCTTTCTGGCAACAACTTTGTTAACCTACCAAGCGACATTTCCAAACACTCTACGCTTGAATATCTCTGTCTAAACTCGTGCAAGAAGCTTCAGTCATTGCCTGAGCTTCCATTAAGCATAAAAAGAATAGATGCAACCAACTGTTCCTCATTGGTAGCTTCTGTACAATGGCACTTACCAAGAGAACGGAAGGGGATTTGCTTTCCGAGAACACGATTCGACATGCTTATCACAGGCAATGAAATTCCATCATGGTTTGCACCTCAAAAGTCCTCTTCCTTTGCAGAAATACCATTTCCTCATCCTTCTCCTCCAACTGAATGGCTGGGATTTGCTCTGTGTTTCTTGCTGGTAGCGGATCGGCCTCTGAAGTATTACCATACATGGATCACTTGTTACACGGCAACACAAACATCAGCCAACAAAATAATGGTACCGGATAAAGATGATTGGAGGGCTGAGTCTCACGTGATCACCAGGATTGTTCCTCTTATGGAGCCAAAACTACCTCACCTTTACATTCTCTTTCTGTCCGTTGGAGAATACCTTGAAAGAATGCATACAGGTTATGGGTTTGGTTTGACGTGTTGGCCTGAGAACGACGGTTCATTGAGAATAGTGCAGGCTGGGTGTCGTCTGGTGTGCAAGGAAGATGTTCAAGATATTTATGGAAATCATTCCCATACTTCCTCTGTAGGGCCTAATAAAAAACAAACAAAAAAGAAACAATCGTGA 2880 0.4087 MITDVPSSSSSPSPTVKTRRWINHVFISFRGEDTRKGFTDHLYAALERRGCIKTFKDDHDLESGEIISEGLIKGIQESMFALVVLSPNYASSRWCLDELQNIIECREKFNQVVFPIFYGVESSDVRYQRGTFEEAFRKHEERFKEEKGKVERWRDALQKVASYSGWDSKDRCSKTDKHLLMTHDVHQTCELEGLVQEEALHLLCLKAFKQDQPKSQYQNLCSKVVQYTRGLPLALEVLGSHLCGRTPEAWDSALKQLRSSPHPEIQNSLKISFESLASTEREMFLDIACFFKGMNKDEVVKVLENCGHFPQIGIEILIEKSFVTLGWGNKLEMHDLLEEMGKNIVFQESPNDPGKRSRLWSHDDISRVLTQNKGTEAIQAIVHYTRENEARWSSEAFSKTSNIRLLKIRNPCRLSHGLDCLPYALRVLDWLGCPLKTLPLTDQLDVVDINLSWSKIKQLWHGKKILHKLKCINLSFSQNLNQTPDFVEVPNLESLDLGGCKRLTKIHSSVMHLKKLVQLNLEGCKRLKALPGKMEMSSLKVLNLSGCSNMNTIPDFGNCMGHLEELRLDGTAVTELPSSLGCLVGLVLLHLQNCRYLVCLPDTIHKLKSLKVLNVSYCSKLRSLPECLQEMNNLEVLYAINTAIEELPLFLCYLENIKVVSFAGCKESTSVLNCFRVPSAVCRPSLLIRLDLSYCNLLAESIPDGFCGISLRDLDLSGNNFVNLPSDISKHSTLEYLCLNSCKKLQSLPELPLSIKRIDATNCSSLVASVQWHLPRERKGICFPRTRFDMLITGNEIPSWFAPQKSSSFAEIPFPHPSPPTEWLGFALCFLLVADRPLKYYHTWITCYTATQTSANKIMVPDKDDWRAESHVITRIVPLMEPKLPHLYILFLSVGEYLERMHTGYGFGLTCWPENDGSLRIVQAGCRLVCKEDVQDIYGNHSHTSSVGPNKKQTKKKQS 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00372 959 Gene3D Ribonuclease Inhibitor 553 771 IPR032675 -
Arst2g00372 959 Pfam TIR domain 24 172 IPR000157 GO:0007165
Arst2g00372 959 SUPERFAMILY L domain-like 385 754 - -
Arst2g00372 959 Gene3D - 193 277 IPR042197 -
Arst2g00372 959 ProSiteProfiles Leucine-rich repeat profile. 710 731 IPR001611 GO:0005515
Arst2g00372 959 Gene3D - 16 192 IPR035897 -
Arst2g00372 959 PRINTS Disease resistance protein signature 228 242 - -
Arst2g00372 959 PRINTS Disease resistance protein signature 534 550 - -
Arst2g00372 959 Pfam NB-ARC domain 186 277 IPR002182 GO:0043531
Arst2g00372 959 ProSiteProfiles TIR domain profile. 21 183 IPR000157 GO:0007165
Arst2g00372 959 SUPERFAMILY "Winged helix" DNA-binding domain 264 369 IPR036390 -
Arst2g00372 959 SMART till_3 22 163 IPR000157 GO:0007165
Arst2g00372 959 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 166 IPR035897 -
Arst2g00372 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 287 IPR027417 -
Arst2g00372 959 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 190 - -
Arst2g00372 959 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 538 669 IPR044974 GO:0006952
Arst2g00372 959 Gene3D Ribonuclease Inhibitor 382 552 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00372 Arst-Chr2 3322045 3327950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00372 217 692 WRKY Transcription Factor Family AT4G12020 34.756 1.50e-72 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00372 - - ahf:112733264 1375.15