Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00315 GGTTACTCCATAGCCATAGCACTCGGCTTCCTTTTCCTCCTCTCCACAATCATCCTCTCTTCCTACCTCTGCTGCCGCGCTCTCCGCCACAACAACGACAACAATAACCGCCGCAGGAACCAAAACGACGGTGTCGTTTTGCCACGTGTCATTTTCGTAGCTGAGAACGACGTTGAAAATAACCAGCCTGGTGGAGGAAACGACAGCGCCGTTTTGGGTCTGGACCAGATCGTAATTAACTCGTACCCTAAGTTTCAGTTTAACGGCAACAACGACGTTGATGTTGACAGCATGTGTTCGATTTGTTTGTGTGAGTACAAGGATTCGGAGATGCTGAGGATGATGCCGGAGTGTCACCACTGCTTCCACGTGTCATGTCTTGATTCGTGGCTCAAGCTTAATGGCTCTTGCCCTGTTTGCCGGAACTCTCCGATGCCGACGCCGCTACCCACGCCGCTGCAGGAGGTGGTGCCGCTCTCTCTCTATGCCGCTGATAGGAGGGGAAGGAGTTGA 513 0.5283 GYSIAIALGFLFLLSTIILSSYLCCRALRHNNDNNNRRRNQNDGVVLPRVIFVAENDVENNQPGGGNDSAVLGLDQIVINSYPKFQFNGNNDVDVDSMCSICLCEYKDSEMLRMMPECHHCFHVSCLDSWLKLNGSCPVCRNSPMPTPLPTPLQEVVPLSLYAADRRGRS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00315 170 SMART ring_2 99 140 IPR001841 -
Arst2g00315 170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 145 IPR013083 -
Arst2g00315 170 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Arst2g00315 170 SUPERFAMILY RING/U-box 91 146 - -
Arst2g00315 170 PANTHER RING-H2 FINGER PROTEIN ATL67 1 168 IPR044289 GO:0016567|GO:0016740
Arst2g00315 170 Pfam Ring finger domain 98 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00315 Arst-Chr2 2817132 2817824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00315 1 161 C3H Transcription Factor Family AT5G07040 39.264 1.82e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00315 - - adu:107472862 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00315 2 2817132 2817824 Arst2g00315 2 2817132 2817824 ECH
Arst4g03332 4 111338078 111339132 Arst2g00315 2 2817132 2817824 PCT