Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00303 ATGGACGACGATTGGGATCTCCACGCCGTTGTTAGAGGCTGCGCCACCATTTCCTCCACCTCTTCCACTACCACTACCACCACCTCCACCACCACCACTTCCTACCAACCTCCACCTTCTTCTTCATGTGGGTTCTTTAACGAACAACAAAGCAATGTTTTTTCGGTTTCCAACAACAACCCTTTTGAATTAAGAAGCTCCATTCAGGAACTTCAGCATAATCATAATCTTTGCAAGCCTTTCTTCTTCAAATCACAGCCTTTTCAGTCTTTTCAATCCTCTTCTTCTTCATCATCACCACCCAATTCAGCTCTGACACAACATAAACAGCAGCAACAGAATTGTAATAACGGTAAGAACCCTCACCATGCAGGTTCAGCTACCACCCCACGATCTAAAAGAAGGAAGAATCAGCTTAAGAACGTTTGTCAAGTTTCAGCTGAGAATCTCTCCTCAGACGTATGGGCATGGAGGAAATATGGACAGAAACCCATCAAAGGTTCACCATATCCAAGAGGATATTATAGATGTAGCAGCTCAAAAGGATGTTTGGCTAGAAAACAAGTTGAAAGGGACAGATCAGATCCAACAAAGTTCATAGTTACATTCACTGGTGTACACAACCACCCTGCTCCAACTCATAGAAACTCACTTGCTGGCTCTTCACGCCAAAAGCTACAAACACCTGAAATAGCCACTACAGGGGACACTGAAATGGTCCTCACAATGAAGCCGGTCTCGATTTTGGCTTCTCCTTCCACTTCAGGAGTGGAAGAAGAGGCTGAAACCGAGGCCACACCGGCACAGAAGTCGGAGAGCGAAGAGGACAACATGGAGGATTATTTGATGAATGATGATGATGGTGGGTTTGAGGAAACTGAGTTTGGTTCACCAGATATGGAGATAACTGATGATTTCTTTGAAGGGTTGGATGAACTGACAACAGCCACTGATGGAGACTCATGCTTTTCAACAAGTGTTCCTAATCCTTCCCTTCCTCCTTTTGTGGCCAATAGTGCTGCCACTGCTGCTGGTGGTAGCTGA 1044 0.4521 MDDDWDLHAVVRGCATISSTSSTTTTTTSTTTTSYQPPPSSSCGFFNEQQSNVFSVSNNNPFELRSSIQELQHNHNLCKPFFFKSQPFQSFQSSSSSSSPPNSALTQHKQQQQNCNNGKNPHHAGSATTPRSKRRKNQLKNVCQVSAENLSSDVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERDRSDPTKFIVTFTGVHNHPAPTHRNSLAGSSRQKLQTPEIATTGDTEMVLTMKPVSILASPSTSGVEEEAETEATPAQKSESEEDNMEDYLMNDDDGGFEETEFGSPDMEITDDFFEGLDELTTATDGDSCFSTSVPNPSLPPFVANSAATAAGGS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00303 347 MobiDBLite consensus disorder prediction 92 137 - -
Arst2g00303 347 Pfam WRKY DNA -binding domain 153 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst2g00303 347 MobiDBLite consensus disorder prediction 278 302 - -
Arst2g00303 347 SMART WRKY_cls 151 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst2g00303 347 MobiDBLite consensus disorder prediction 92 127 - -
Arst2g00303 347 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 316 IPR044810 GO:0003700
Arst2g00303 347 MobiDBLite consensus disorder prediction 20 42 - -
Arst2g00303 347 MobiDBLite consensus disorder prediction 250 302 - -
Arst2g00303 347 MobiDBLite consensus disorder prediction 209 226 - -
Arst2g00303 347 MobiDBLite consensus disorder prediction 206 226 - -
Arst2g00303 347 FunFam WRKY transcription factor 22 134 205 - -
Arst2g00303 347 ProSiteProfiles WRKY domain profile. 146 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst2g00303 347 SUPERFAMILY WRKY DNA-binding domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst2g00303 347 Gene3D WRKY domain 135 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst2g00303 347 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00303 Arst-Chr2 2738694 2740504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00303 1 346 WRKY Transcription Factor Family AT4G01250 44.986 9.93e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst2g00303 WRKY 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00303 K13425 - gmx:100815829 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00303 2 2738694 2740504 Arst5g04420 5 105523639 105526956 ECH
Arst2g00303 2 2738694 2740504 Arst2g00303 2 2738694 2740504 ECH
Arst2g00303 2 2738694 2740504 Arst4g03320 4 111255256 111257627 ECH
Arst9g00409 9 3328122 3335028 Arst2g00303 2 2738694 2740504 ECH
Arst4g03320 4 111255256 111257627 Arst2g00303 2 2738694 2740504 PCT