Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00298 ATGGTGTCGGTGAATCCGAACCCAGCTCAAGGATTTTACTTCTTCGATCCTTCTTCGTCCAATATGGGACTTCCCGGCGTTAATCCGATGCCGCCGCCGCCTCCGCCGCAGCATGCTCCGGCAACCGTGCCATCAGCTGCGTCTTCTAAGTCTAGGGAGAGCTGGACCGAGCAGGAGCATGACAAGTTTCTAGAAGCTCTTCAATTATTTGATCGTGATTGGAAGAAAATTGAAGCATTTGTCGGCTCAAAAACTGTTATCCAGATACGGAGTCATGCACAAAAGTATTTCCTTAAAGTCCAGAAGAATGGAACAAGTGAACATGTACCTCCCCCTCGGCCAAAGAGAAAAGCTTCTCATCCATACCCTCAAAAAGCTCCCAAGAGTGCTCCTACTGCATCCCATGTCACTGGGCCATTGCAATCTTCCTCAGCTTTCATTGAACCTGCATACATTTATAGCCCGGATTCATCATCTGTGCTAGGAACTCCAGTAACCAGTGTGCCTTTATCATCTTGGAATTATAACACCATTCCACCAAGCAATGTGCCCCCAAGCAATGTGCCACCAGCAACTAAAGATGATATGGGATTGGCTGGAGCTGGACAAGCTGTCCCTCTTACTTGTTGCTATAGCAGCAGTAATGAGAACACCCCTCCAACTTGGCCAAGTAACAATGGGTTTGAACAAAGAAACCAGACCAAGCCAATTAAAGTTATGCCAGATTTTGCACAAGTCTACAGCTTCATTGGCAGTGTATTTGATCCCAATTCTACTAATCATCTCCAGAGGCTGAAACAGATGGACCCAATAAATATGGAAACGGTACTGTTGTTGATGAGAAACCTCTCCATGAATCTAATGAGTCCTGAATTTGAGGATCATAAGAGGCTGCTTTCGTCATACGGAGCCAACCCTGAAGAGGCAAAGTTTGTCAATCCTTGCAGCAAGTTGCTCAAATCTGAGAGTGCTGTTCTAACTGCTTAA 987 0.459 MVSVNPNPAQGFYFFDPSSSNMGLPGVNPMPPPPPPQHAPATVPSAASSAVNVAEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKASHPYPQKAPKSAPTASHVTGPLQSSSAFIEPAYIYSPDSSSVLGTPVTSVPLSSWNYNTIPPSNVPPSNVPPATKDDMGLAGAGQAVPLTCCYSSSNENTPPTWPSNNGFEQRNQTKPIKVMPDFAQVYSFIGSVFDPNSTNHLQRLKQMDPINMETVLLLMRNLSMNLMSPEFEDHKRLLSSYGANPEEAKFVNPCSKLLKSESAVLTA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00298 347 Gene3D - 74 121 - -
Arst2g00298 347 CDD SANT 73 116 IPR001005 -
Arst2g00298 347 SUPERFAMILY Homeodomain-like 65 121 IPR009057 -
Arst2g00298 347 MobiDBLite consensus disorder prediction 120 157 - -
Arst2g00298 347 MobiDBLite consensus disorder prediction 24 57 - -
Arst2g00298 347 FunFam protein REVEILLE 6 isoform X1 73 121 - -
Arst2g00298 347 ProSiteProfiles SANT domain profile. 69 122 IPR017884 -
Arst2g00298 347 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Arst2g00298 347 NCBIfam myb-like DNA-binding domain, SHAQKYF class 69 118 IPR006447 GO:0003677
Arst2g00298 347 Pfam Myb-like DNA-binding domain 71 116 IPR001005 -
Arst2g00298 347 MobiDBLite consensus disorder prediction 26 41 - -
Arst2g00298 347 PANTHER SWI/SNF COMPLEX-RELATED 46 307 - -
Arst2g00298 347 SMART sant 70 118 IPR001005 -
Arst2g00298 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00298 Arst-Chr2 2661195 2665284 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst2g00298 Myb_DNA-binding 3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00298 - - aip:107622330 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g00298 2 2661195 2665284 Arst2g00298 2 2661195 2665284 ECH