Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00288 ATGGCCACTTCCGCCGCTGCGCCGCGCCAGCTCTCTCAGAAGGAGCAAGACATCCAGATGATGCTTGCGGCTGAGGTGCATTTGGGAACCAAAAACTGCGACTTCCAGATGGAACGCTATGTCTTCAAACGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTCGCCATCGAGAATCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAATTTGCCCAATACACCGGTGCAAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTTCTTATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACAATTGCCTTTTGCGATACTGATTCTCCAATGCGGTATGTTGATGTTGGCATTCCTTATTAGATAATTATGTCAACTTTTCATGTGTAGGTGGATCTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAAGCACCAGCTGCCCCAGAATATGCCATTCAAGACTTCGGTGCTGCTGGCATTGCCGGTTTCCCCACAGCTGATGGTGAATGGACGGCTGTCACAGAACAACCCTGGCCCGAGGCAGTTCCACAACAACCTATTGCAGCTGCGCCTGCTGATTGGGCCCCAGATACTTCTGCAGCTGCAGGTGATTGGGAACCGGTTCCAGCTCCTCAGCCTTCCGTTCCGGCACCCGGAGCTGTTGCTCCCACTGGTTGGGAATAG 840 0.5024 MATSAAAPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPYXIIXMSTFHVXVDLFFYREPEEAKQQEEEEAPAAPEYAIQDFGAAGIAGFPTADGEWTAVTEQPWPEAVPQQPIAAAPADWAPDTSAAAGDWEPVPAPQPSVPAPGAVAPTGWE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00288 280 PRINTS Ribosomal protein S2 signature 122 139 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g00288 280 PRINTS Ribosomal protein S2 signature 18 36 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g00288 280 PRINTS Ribosomal protein S2 signature 139 150 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g00288 280 PRINTS Ribosomal protein S2 signature 48 57 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g00288 280 PRINTS Ribosomal protein S2 signature 97 114 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g00288 280 MobiDBLite consensus disorder prediction 216 280 - -
Arst2g00288 280 PANTHER 40S RIBOSOMAL PROTEIN SA 172 268 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g00288 280 Gene3D - 17 199 - -
Arst2g00288 280 ProSitePatterns Ribosomal protein S2 signature 2. 122 146 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g00288 280 Pfam Ribosomal protein S2 21 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g00288 280 Hamap 40S ribosomal protein SA [rps-0]. 5 226 IPR027498 GO:0003735|GO:0006412|GO:0015935
Arst2g00288 280 NCBIfam 30S ribosomal protein S2 14 165 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g00288 280 ProSitePatterns Ribosomal protein S2 signature 1. 18 29 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g00288 280 SUPERFAMILY Ribosomal protein S2 13 165 IPR023591 -
Arst2g00288 280 CDD RPS2 21 165 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g00288 280 FunFam 30S ribosomal protein S2 17 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00288 Arst-Chr2 2571294 2573656 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00288 5 272 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 61.905 2.27e-120 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00288 K02998 - gmx:100786575 377.867