Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00271 ATGGCTGCTGAACTTGTTGGTGGAGCTTTTCTTAATGGCTTCATTAACGTTGTCTTTGACAGGCTCCTTACAACTGATGCTGTCAACAAGGTGTTTGGCAAGAAGCTTGGTTCTGACTTGGTTCAAAGGCTGAAGACTGTCCTGTTGGGTGCTGAAGGTCTTGTTGCTGATGCTGAGTTGAAGCAGTTCGGTAATCCATCTGTGAGGAAGTGGCTCGATAGTCTCCGGGATGCTGTTTACTGTGCTGAGGACTTGCTGGACACTGTCCTCGCCAAAGCTGCCACACAAAAGGAGGAAAGTTCTTCCTGGTGGTCCCCTAGCTTCTTAGTCAACCGAGATAGGGATGACATGGTAGAGAAGATGGAAGGGGTGGTTAGAAGAATTGAGGATCTTGGAAAACAAAAAGATTTCCTTGGTCTTGAAAAGATTCCCACTGGTGGCTCATCATGGAGGACTCCAACCAGTTCTCTTGTGAGAGGGAATGTGTATGGCAGGGAGGATGACCAGAAGGCCTTAGTCCAGATGCTGAAGGACAACAATGAGCATCACCTGTCTGTGATAGCTATTGTTGGCATAGGTGGGGTTGGTAAAACTACTTTAGCCCAATGGCTGTACAACAATGAGGATGAGTTCATGAAGGGATTTGATCTGAAAGCATGGGTTTGCGTTTCAGAGAAGTTTGAAGTTGTTGAGACTACAAGGAATGTCATAAAGCAGATCCGTGGAGGTACTTGTAGTCTCGATGATTTTAATTCACTTCAAAATGCTTTGAAAGAAGAATTGTCCAATAAGAAGTTCTTTATTGTTCTTGATGATGTTTGGAGTGATGATGGTGACAAATGGAGTAATTTTATGACCCCTTTCCAACAAAATGGAAATAAGGGAAGTATTATTCTTCTGACTACTCGAGAGGAAAATGTTGCTTTCGCAGTTCAAAATTGTCAGCCTTATTTTCTCAAGAAGTTGTCGGAGGACTATTGTTGGTCAGTGTTTGCGGAAAATGCATCTTTTCCAGAATCAAATGGGAGAGCAGCACTTGAAGAAATAGGCAGAAAGATTGTCAAGAAGTGTGATGGCTTGCCATTAGCTGCAGAAACACTTGGTCGCTTGTTACGTACTAATCATGATGTTGAGAAATGGAACAAGATACTAATGAGTGATATTTGGGAATTTTCGTTGGAGAAGAGTAAGATTATTCCAACATTACTGATAAGTTACTTCCATCTTCCTCTATATTTAAAACGTTGTTTTGTTTATTGTGCTTTATTTCCCAAGGATTATAGATTTAGGAAAGATGAATTAATCCTTTTGTGGATGGCAGAAGATCTTTTACCACCACCAAAGAGAGGAGAGAGTTTAGAAGAAGTTGGTTGTGAGTGTTTTGATGAACTAACTTCCAGATTATTTTTCACAAAGGTTCATTATTATTTTGTGATGCATGATCTTTTGCATGACTTAGTAATATTCTTTGCTGGAGATTTCTATTGCAACTCAGAAGAACTTGGTAAAGAGGAGGAGATAAGGATTCTGACTCGGCATTTGTGTGTAGCTTTAAGTCGTTGTAGCTCAAAACTTTATAATTCTATTTCTAAAGTAGAATCTTTGAGAACATTATTATTGTTTGATGATTTCTCATCTCCCAACTGCAACATTGAAGCGGCAACATGTGAGATATTATCAAAGTGTAAATACTTGAGAGTTTTATCCTTTGATAAACTTGATGTGTGGCCTAATTCAATAGGAGAATTGATCCATCTGCGCTACTTGGATCTCTCTTGGACTGATATTAGGACATTGCCAGAGTCTTTGTGCAACTTGTGTAATTTGCAAACATTGAAGTTGCGTTGTTGTTTCAAGCTAACTTCGCTGCCTAGTGGTTTGCATAATCTTGTGAGTTTGCAGCATCTTGATATAGGAGAAACTGCTTTGGAAGAAATGCCCAGAAAAATGAGCAAATTGAATCAGTTGCACGTTTTAGGTTACTTTGTCGTCGGCAAGCACGAAGACAATGGAATCCAGGAGTTAGGAGGGCTGGTAAATCTTCATGGATCCGTTGAGATTAGGAAGCTGGAGAATATTGTTGATGTGCAAGAAGCAAAGAGGGCAAAGATAATGGATATGAAGCACATTGATGCATTATGTTTGGAATGGTCTTCAGGTGATGATTTGGTTTCAAGTACACAAAAAGAAAGAGACATTCTCGATAACTTGCAACCGCAGAATGGGTTGAAAGAGTTGATAATCCAGGGATACAAGGGTACAATATTTCCAAATTGGGTTGGGCATTGTTGCTACCAAAACATGACAAGTGTATCTCTAGAGTGTTGCAAGAATTGCTGCATGCTGCCTTCACTTGGACAGCTGCCATCTCTAAAGTCCCTGCGCATTGAAGGTTTGGATCAGCTGAGGAGTATTGGCGAGGAGTTTTACAAGAATGATGGAGATGATCATTCTTCGCATATTGCACCGTTTCCCACACTTGAGAGTTTGGAGTTTGATAACATGGCATGTTGGGAGGTGTGGCACGTATCTGAGTCAGAAACTTTTCCTCAGCTTAGGAAGCTTGAAATAAGAAATTGCCCAATGTTGAAGGAAGAGATGCTTAATCAGGTATTCTTCAGAATAATTTCTTCTTTGTTGGATGTTTCCAAAGTTCGCAAACTACGTATAGGCGACCACTTTATAAACCCGCAAACCGAGGCCATGTTTGTTGATGGGGATACTTTAACAATTAGCGGGAGTGAATCTGTGAAGGAGTCTGCATTTAAGGCAATGATCAGCATCAACCATCTACGTTGCCTCCAAGAAATACACATCTCAGGGTGTAGAAAACTAGAATTCCCCCAGCTACAGCAGCATAAGTATAATTTGGTAGAGCTACAAATACAATCCAGCTGTGATTCACTGAGCTCCTTGTCGTTGGATGTCTTTCCCAATCTCAAGAATCTCCAGATAGTATGGTGTAGGAATCTGGAATCAGTGTCAATGTCAGAGGCACCACACGCTGCTCTGGAAAATGTCACCATCGTCGGCTGCGATAAATTAGTGTCATTTGCTGTTGCTGGAGAAGGACTGGCTGCACCCAACTTGACTCATCTCAAGGTCAAATACTGCTCAAAGTTGGAGGCATTACCACGTGACATGAAGAGTCTACTCCCAAGTTTACAGTCCCTCGAGATATATGGTTGCCCAAACATTTGCAGGATACCAGAGGGTGGTTTGCCGCCTAACTTGAAATCACTTGCTGTGGGAGGTTGCGAGGAACAAGTGAGGGATCTATCATGGATGGGCAACTTGCACGCCCTCACTCATCTTACCATTGAAGGTTTAATGTGTAAGAACATAAAGTCATACCCAGAGGAAGCTGAAGAATATGGAAGGAAAAAAGCTGCCTCCCTCTCTATTGCTACTCAAAATTGA 3420 0.4135 MAAELVGGAFLNGFINVVFDRLLTTDAVNKVFGKKLGSDLVQRLKTVLLGAEGLVADAELKQFGNPSVRKWLDSLRDAVYCAEDLLDTVLAKAATQKEESSSWWSPSFLVNRDRDDMVEKMEGVVRRIEDLGKQKDFLGLEKIPTGGSSWRTPTSSLVRGNVYGREDDQKALVQMLKDNNEHHLSVIAIVGIGGVGKTTLAQWLYNNEDEFMKGFDLKAWVCVSEKFEVVETTRNVIKQIRGGTCSLDDFNSLQNALKEELSNKKFFIVLDDVWSDDGDKWSNFMTPFQQNGNKGSIILLTTREENVAFAVQNCQPYFLKKLSEDYCWSVFAENASFPESNGRAALEEIGRKIVKKCDGLPLAAETLGRLLRTNHDVEKWNKILMSDIWEFSLEKSKIIPTLLISYFHLPLYLKRCFVYCALFPKDYRFRKDELILLWMAEDLLPPPKRGESLEEVGCECFDELTSRLFFTKVHYYFVMHDLLHDLVIFFAGDFYCNSEELGKEEEIRILTRHLCVALSRCSSKLYNSISKVESLRTLLLFDDFSSPNCNIEAATCEILSKCKYLRVLSFDKLDVWPNSIGELIHLRYLDLSWTDIRTLPESLCNLCNLQTLKLRCCFKLTSLPSGLHNLVSLQHLDIGETALEEMPRKMSKLNQLHVLGYFVVGKHEDNGIQELGGLVNLHGSVEIRKLENIVDVQEAKRAKIMDMKHIDALCLEWSSGDDLVSSTQKERDILDNLQPQNGLKELIIQGYKGTIFPNWVGHCCYQNMTSVSLECCKNCCMLPSLGQLPSLKSLRIEGLDQLRSIGEEFYKNDGDDHSSHIAPFPTLESLEFDNMACWEVWHVSESETFPQLRKLEIRNCPMLKEEMLNQVFFRIISSLLDVSKVRKLRIGDHFINPQTEAMFVDGDTLTISGSESVKESAFKAMISINHLRCLQEIHISGCRKLEFPQLQQHKYNLVELQIQSSCDSLSSLSLDVFPNLKNLQIVWCRNLESVSMSEAPHAALENVTIVGCDKLVSFAVAGEGLAAPNLTHLKVKYCSKLEALPRDMKSLLPSLQSLEIYGCPNICRIPEGGLPPNLKSLAVGGCEEQVRDLSWMGNLHALTHLTIEGLMCKNIKSYPEEAEEYGRKKAASLSIATQN 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00271 1139 Gene3D - 321 405 IPR042197 -
Arst2g00271 1139 Gene3D - 406 488 IPR036388 -
Arst2g00271 1139 SMART LRR_typ_2 630 653 IPR003591 -
Arst2g00271 1139 SMART LRR_typ_2 583 606 IPR003591 -
Arst2g00271 1139 PRINTS Disease resistance protein signature 186 201 - -
Arst2g00271 1139 PRINTS Disease resistance protein signature 929 945 - -
Arst2g00271 1139 PRINTS Disease resistance protein signature 357 371 - -
Arst2g00271 1139 PRINTS Disease resistance protein signature 260 274 - -
Arst2g00271 1139 Pfam NB-ARC domain 166 384 IPR002182 GO:0043531
Arst2g00271 1139 PANTHER DISEASE RESISTANCE PROTEIN RP 69 865 IPR044974 GO:0006952
Arst2g00271 1139 Pfam Rx N-terminal domain 38 102 IPR041118 -
Arst2g00271 1139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 420 IPR027417 -
Arst2g00271 1139 SUPERFAMILY RNI-like 826 1113 - -
Arst2g00271 1139 Gene3D Ribonuclease Inhibitor 515 900 IPR032675 -
Arst2g00271 1139 SUPERFAMILY L domain-like 478 873 - -
Arst2g00271 1139 Gene3D - 154 316 IPR027417 -
Arst2g00271 1139 Gene3D Ribonuclease Inhibitor 901 1123 IPR032675 -
Arst2g00271 1139 Gene3D - 22 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00271 Arst-Chr2 2390483 2396998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00271 172 371 WRKY Transcription Factor Family AT5G45050 27.053 6.22e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00271 - - aip:107645700 1669.44