Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00220 ATGCGCCTCCACGCCATGGACCAGCTTCCCCAACCCGAGCGCCACCGCAGCGACAAATACACTTCCACTGCTCTTGCCGTCACCGCCACCAGACTCACCACCAAGCGGATCCTTCAAAAGGACGGCCCAACCCCCGCCAGAACCATGAGGTACCGGGGTGTGAGGCGGAGGCCTTGGGGACGTTATGCCGCTGAGATAAGGGACCCTCAATCTAAGGAGCGGCGTTGGCTGGGGACATATGACACGGCGGAGGAAGCCGCCCGCGCCTACGACACCGCCGCCAGAGTCTTGCGTGGCCCCAATGCGAGAACCAACTTTGTGTACTATACTTTCCCTCCTCAACCTTTTTCCATCTCCGTCACCAACAAAAATAACCATAAAGACATCCTTAACCGCAGTAGCCACCTCTTGGGAAGCCAGTTCAGCTTCTCCATCCATCCTAACCAACTCTTCAACTGCCGTAACCGCTTCTTGGGTGGTTTTTGGCCTGACTCCTTCTCCTCCTACTCCGCCCCTTCTTCATTTTCTACCTTCCAGCAACAGCGAAACCAGCAGCTTAACTCCACAAACATGCTCCTCCCCGGTGACTTCATAGCCCCTTCTGTTTCATCTTCCTTTAGCCAGCATTTATCCAACCCCAAGGGCAGTTTGGTCAACTCATCACATGGTGGCCATGTTAACCCTTCTCCTTCATCTTCATTTAGTCACCATTCATCCTACCCCAGAGGCAGTATCAACTCATCACATGGTGGCAATGCTAATCCTTCTCTTTCATCTTCCCTTAGACAGCCTTTATCATACCCCAAGGGCAATTTAGTCAACTCATCACATGGTGGCAGTGCTAACCCTTCTGTTTCATCTTCTTCCTTTAGCCACCACTTATCATACCCCAAGGGCAGTTTAGTCAACTCATCACATGGTGGCAATGCTAATAACCTTTCTCTTTCATCTTCGTTATCCTACCCCAAGGGCAATTTAGTCAACTCATCACATGGTAGCAATGCTCCTAACTACACCGCACCCTTTTCTTCCTCTTGCCTGACAAACACAAACAGTCTCGGTTGTGGCAGTGAATACTCGCAAGAGTTCTTTCATCACTCAGACTCATCATCGGAGTTGTTGGAAGACATAGTTAGCGGTTTCTTGAAAAGTCCAAAGCCCACTAAAAGTGAGTGTCTGTTGTTAGGTGCTCCTACTTCTCCATCACAAGATTCTTCCCACCTTAAGGCTGAGTCATTTCCTCCTCTTTCCGCTGTTTCCACAGGCCAGATGATGAAGAAAGACGAGGATTTTAATGTTCCTTTGTATCAAGATGGTTTCCACATGCAGCAACTTGGTGTTTTTAATTTCAATGGCTCTAGCAATGCGGCAGTTCCCTCTGGCATGCCTCTTACTCAGGAGAAGAAGATAGACGACGACGACGACGACGACGACAACAACAACAACAACAGTAATCATCTTGAAGAGTGGCCTATCATGGAAGACATTTTTAATCAGTACCCGGACTTTCTTAATGATTTTCTTAATTAG 1530 0.4882 MRLHAMDQLPQPERHRSDKYTSTALAVTATRLTTKRILQKDGPTPARTMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTYDTAEEAARAYDTAARVLRGPNARTNFVYYTFPPQPFSISVTNKNNHKDILNRSSHLLGSQFSFSIHPNQLFNCRNRFLGGFWPDSFSSYSAPSSFSTFQQQRNQQLNSTNMLLPGDFIAPSVSSSFSQHLSNPKGSLVNSSHGGHVNPSPSSSFSHHSSYPRGSINSSHGGNANPSLSSSLRQPLSYPKGNLVNSSHGGSANPSVSSSSFSHHLSYPKGSLVNSSHGGNANNLSLSSSLSYPKGNLVNSSHGSNAPNYTAPFSSSCLTNTNSLGCGSEYSQEFFHHSDSSSELLEDIVSGFLKSPKPTKSECLLLGAPTSPSQDSSHLKAESFPPLSAVSTGQMMKKDEDFNVPLYQDGFHMQQLGVFNFNGSSNAAVPSGMPLTQEKKIDDDDDDDDNNNNNSNHLEEWPIMEDIFNQYPDFLNDFLN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00220 509 MobiDBLite consensus disorder prediction 458 487 - -
Arst2g00220 509 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 276 - -
Arst2g00220 509 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
Arst2g00220 509 MobiDBLite consensus disorder prediction 1 20 - -
Arst2g00220 509 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Arst2g00220 509 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Arst2g00220 509 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Arst2g00220 509 Gene3D AP2/ERF domain 49 108 IPR036955 GO:0003700|GO:0006355
Arst2g00220 509 Pfam AP2 domain 50 99 IPR001471 GO:0003700|GO:0006355
Arst2g00220 509 MobiDBLite consensus disorder prediction 209 289 - -
Arst2g00220 509 FunFam Ethylene-responsive transcription factor 2 49 108 - -
Arst2g00220 509 SUPERFAMILY DNA-binding domain 50 107 IPR016177 GO:0003677
Arst2g00220 509 CDD AP2 50 106 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00220 Arst-Chr2 2003516 2005045 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00220 48 108 AP2-EREBP Transcription Factor Family AT1G24590 85.246 3.88e-30 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst2g00220 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00220 - - adu:107472834 915.22