Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00208 ATGGGTTTTCCGGTGGGCTACACGGAGGTTTTCTTCCCTCACCTCTTCCTCCGCTTACTCACCTTCCTCGGCCTCCTCCGTAACCTCGTCTTCCACCTCTTCCGCCTCCTCGGACTCTCCGAACTCCTCATCGACACCACCACCGACAACAACAACAACTACTACAACCACAACCCCAACCCTCGTAACCTTCAGAGAAATACTCGCTAGCGATGACGTGGCATCGCCTCAACTAACTGGCAGCTGCGCGGTTTGCCTAACGGAATTAGTTATGGAGGACGAGATCCGGTGGTTGCGTAACTGCAAGCACGTGTTCCACAGGGAGTGTGTGGACCGTTGGATTGATCACGATCAGAAGACGTGTCCGCTTTGTAGGACGTCGTTTGTTCCTGATGAAATGGTTGATCAGTATAATCAACGGTTGTGGGCTGCTTCTGGTGTTAGTGAGTTCTACGTAGATTACACTTCTCTCTAA 475 0.5179 MGFPVGYTEVFFPHLFLRLLTFLGLLRNLVFHLFRLLGLSELLIDTTTDNNNNYYNHNPNPTRTPSAADRTPSLSGILIREFLPVVTFREILASDDVASPQLTGSCAVCLTELVMEDEIRWLRNCKHVFHRECVDRWIDHDQKTCPLCRTSFVPDEMVDQYNQRLWAASGVSEFYVDYTSL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00208 181 SUPERFAMILY RING/U-box 83 155 - -
Arst2g00208 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 156 IPR013083 -
Arst2g00208 181 PANTHER RING ZINC FINGER PROTEIN-RELATED 24 169 - -
Arst2g00208 181 Pfam Ring finger domain 105 149 IPR001841 -
Arst2g00208 181 ProSiteProfiles Zinc finger RING-type profile. 106 149 IPR001841 -
Arst2g00208 181 SMART ring_2 106 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00208 Arst-Chr2 1754514 1755134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00208 1 180 C3H Transcription Factor Family AT1G63840 42.857 5.01e-44 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00208 K16281 - gmx:100790975 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03272 4 110138529 110139485 Arst2g00208 2 1754514 1755134 PCT