Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00189 ATGGTTCTTAGTGGTGTTTTTGGTTTCTTGATGCTGATTAGTAGTTTTGGAACCGCACATGGCACTGATACTGATATCTTCTGCTTGAAGAGTATCAAGGGATCCATTGAAGACCCTTACAACTATTTGCAATCTTGGACTTTCAATAACAAAACCGAAGGGTCTATATGTAAATTCAGTGGGGTTGAGTGTTGGCACCCTGATGAGAACAGGGTCTTGAATCTCAAGCTCTCAAATATGGGGCTAAAGGGTCAGTTTCCCCGTGCCATTCGGAACTGCTCGAGTTTGACAGGGTTGGATCTTTCAATCAACAAGCTATCCGGAACGATTCCAGCGGATATATCCTCTCTTCTGACTTATGTGGTCACTCTTGATCTGTCATCAAATGAATTCTCCGGCACAATACCCGAAAGCCTTGCGAATTGTACTTATCTTAATTCCCTTAAACTTGATTCTAATAGGCTTACTGGTCAAATTCCTGGACAATTCGCCAGCCTCGGACGGCTCAAGACATTCAGTGTAACTAACAATCTTTTGTCCGGGCCAGTTCCAAACTTTAATTCTACTAAAGTGACGGCTTCATATGGAAACAATATAGGCCTATGTGGAGGAACTAACTTGGGAAATTGTCAGCTCCAGTCTTCCAAGAGTAACACTGCAGTCATAGCCGGAGCAGCTGTTGGTGGGGTGACTGTTGCGGTGTTAGGATTGGGCATTGGAATGTTCTTCTATGTGCGCCGTGTCGGTTACAAGAGGAAGAAGGAAGAGGACCCCGAAGGAAACAAATGGGCGAGAAGTATAAAGGGAACCAAAGCAATAAAGGTTTCTTTGTTTGAGAAATCAGTTTCAAAAATGAAAATGAGTGATCTCATGAAGGCTACTAACAAGTTCAGTAACACCAATATCATCGGATCAGGACGAACGGGAACTGTTTACAAAGCTGTTCTTGAGGATGGCACATCACTTATGGTTAAGAGGTTGCAGCAATCCCAGCACTCTGAGAAAGAATTTAGGTCCGAGATGGCTACACTCGGGTCGGTCAAGCACCGAAACCTGGTTCCTCTCTTAGGATTTTGCATGGCCAAAAAGGAGAGGCTTGTGGTGTATAAAAATATGCCAAATGGAAACCTCTATGATCAGCTACATCCGGCCGAAGGTCCGAGCTCCCTTGACTGGACTCTAAGGCTCAAAATTGCAATTGGAGCTGCCAAAGGATTAGCATGGCTTCATCATAGCTGCAATCCCCGAATCATCCACCGAAACATAAGCTCTAAATGCATACTCTTGGATGCTGATTTCGAGCCCAAAATCTCCGACTTCGGCCTTGCCAGACTGATGAATCCTATAGATACACATTTAAGTACTTTCGTCAACGGCGAGTTTGGAGACTTAGGATATGTTGCTCCAGAGTACACAAGAACCTTAGTTGCTACACCAAAGGGAGATGTTTATAGCTTTGGCACTGTGCTTCTCGAGTTGGTAACCGGCGAAAGACCTACCAATGTGGCTAAAGCTCCAGAAACATTCAAAGGGAATCTGGTGGAGTGGATTATGCAGCTCTCTAGCAACTCTCAACTCCATGACGCCATCGATGAGTCTCTAGCTGGAAAGGGAGTTGACAACGAGCTCTTCCAATTTCTGAAGGTTGCTTGCAACTGTGTTTCTTTAACTGCAAAGGAGAGACCAACCATGTTTGAAGTGTATCAGTTTCTAAGAGCAATTGGGAGTAGGTACAATTTCACTACTGAGGATGAGATTTTGATACCTGTAGATATTGGCACTGCTGATAACATGGAGGAACTTATTGTTGCTAGAGAAGCATTTGATGATTGA 1833 0.4403 MVLSGVFGFLMLISSFGTAHGTDTDIFCLKSIKGSIEDPYNYLQSWTFNNKTEGSICKFSGVECWHPDENRVLNLKLSNMGLKGQFPRAIRNCSSLTGLDLSINKLSGTIPADISSLLTYVVTLDLSSNEFSGTIPESLANCTYLNSLKLDSNRLTGQIPGQFASLGRLKTFSVTNNLLSGPVPNFNSTKVTASYGNNIGLCGGTNLGNCQLQSSKSNTAVIAGAAVGGVTVAVLGLGIGMFFYVRRVGYKRKKEEDPEGNKWARSIKGTKAIKVSLFEKSVSKMKMSDLMKATNKFSNTNIIGSGRTGTVYKAVLEDGTSLMVKRLQQSQHSEKEFRSEMATLGSVKHRNLVPLLGFCMAKKERLVVYKNMPNGNLYDQLHPAEGPSSLDWTLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIMQLSSNSQLHDAIDESLAGKGVDNELFQFLKVACNCVSLTAKERPTMFEVYQFLRAIGSRYNFTTEDEILIPVDIGTADNMEELIVAREAFDD 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00189 610 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 41 186 - -
Arst2g00189 610 Pfam Protein tyrosine and serine/threonine kinase 300 570 IPR001245 GO:0004672|GO:0006468
Arst2g00189 610 ProSiteProfiles Protein kinase domain profile. 297 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g00189 610 Gene3D Phosphorylase Kinase; domain 1 258 370 - -
Arst2g00189 610 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 372 591 - -
Arst2g00189 610 Pfam Leucine rich repeat N-terminal domain 23 65 IPR013210 -
Arst2g00189 610 Gene3D Ribonuclease Inhibitor 23 212 IPR032675 -
Arst2g00189 610 FunFam Leucine-rich repeat receptor-like protein kinase 22 185 - -
Arst2g00189 610 Gene3D Transferase(Phosphotransferase) domain 1 372 588 - -
Arst2g00189 610 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 258 371 - -
Arst2g00189 610 SUPERFAMILY Protein kinase-like (PK-like) 276 571 IPR011009 -
Arst2g00189 610 CDD STKc_IRAK 303 571 - -
Arst2g00189 610 Pfam Leucine rich repeat 122 179 IPR001611 GO:0005515
Arst2g00189 610 SUPERFAMILY L domain-like 23 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00189 Arst-Chr2 1578303 1594426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00189 9 597 Receptor kinase-like Gene Family AT3G28450 46.037 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Arst2g00189 PK_Tyr_Ser-Thr 2.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00189 - - psat:127076602 941.414