Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g00162 ATGTCTAAGCTCATCTTTAGCATTGCTCTGTTGGTATTGGTCCAAGCCATCATTTCAGTTGATGGCATTCTCCATCATTGGTATTCTGATGCCAATGCAACCTTCTATGGTGACATGGAAGGTAGAGAAACCATGGGGGGTGCATGTGGCTATGATGATCTCTTTGAGCAAGGGTATGGTCTTATGACCACAGCTGTAAGCCCTGCCCTATTCAACAATGGTTACACATGTGGATCATGTTTTGAGATGAAATGTGTGAACAAGCCCAATTGGAATTATTGCAAAAAGGGCTCAAGCCCAATAAGAGTAACCGTAACAAACTTATGTCCACCAAATTATGGACAAGGTGATGGACATTGGTGCAACCCTCCATATAAGCACTTTGATTTATCAATGAAGATGTTCACAACTATGGCAGAATATAGAGCAGGGATTGTACCTGTTTTATATAGAAGAGTTCCATGCCATAAACAAGGTGGTGTCAAGTTTCAGTTGAAAGGGACACCTTATTGGTTGCTTGTGTTGGTGTTCAATGTTGGTAATGCTGGTGATGTTTCTAGTGTTAGCATCAAAGGGCAAAATGGTAAATGGCTTACTATGTCAAAAAATTGGGGACAAAATTGGTTAATTGGAGTTAACTTGGTTGGACAAAGCTTGTCTTTTAAGGTCACAACTAGTGATAGGAAAACTTTGGTATTTCATCATGTTGCTCCTTCTCATTGGCAATTTGGATCAACCTATGAGGGCAAGCTTAATTTTTAG 762 0.4003 MSKLIFSIALLVLVQAIISVDGILHHWYSDANATFYGDMEGRETMGGACGYDDLFEQGYGLMTTAVSPALFNNGYTCGSCFEMKCVNKPNWNYCKKGSSPIRVTVTNLCPPNYGQGDGHWCNPPYKHFDLSMKMFTTMAEYRAGIVPVLYRRVPCHKQGGVKFQLKGTPYWLLVLVFNVGNAGDVSSVSIKGQNGKWLTMSKNWGQNWLIGVNLVGQSLSFKVTTSDRKTLVFHHVAPSHWQFGSTYEGKLNF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g00162 253 Gene3D - 21 156 IPR036908 -
Arst2g00162 253 Gene3D - 160 253 IPR036749 -
Arst2g00162 253 SMART dpbb_1 63 150 IPR007112 -
Arst2g00162 253 SUPERFAMILY Barwin-like endoglucanases 27 178 IPR036908 -
Arst2g00162 253 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 160 IPR007112 -
Arst2g00162 253 PANTHER EXPANSIN-A15 20 250 IPR002963 GO:0009664
Arst2g00162 253 PRINTS Expansin signature 206 227 IPR002963 GO:0009664
Arst2g00162 253 PRINTS Expansin signature 235 251 IPR002963 GO:0009664
Arst2g00162 253 PRINTS Expansin signature 118 135 IPR002963 GO:0009664
Arst2g00162 253 PRINTS Expansin signature 101 111 IPR002963 GO:0009664
Arst2g00162 253 PRINTS Expansin signature 58 72 IPR002963 GO:0009664
Arst2g00162 253 PRINTS Expansin signature 171 192 IPR002963 GO:0009664
Arst2g00162 253 PRINTS Expansin signature 135 148 IPR002963 GO:0009664
Arst2g00162 253 PRINTS Expansin signature 159 171 IPR002963 GO:0009664
Arst2g00162 253 Pfam Expansin C-terminal domain 161 238 IPR007117 -
Arst2g00162 253 CDD DPBB_EXPA_N 27 155 - -
Arst2g00162 253 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 170 249 IPR007117 -
Arst2g00162 253 Pfam Lytic transglycolase 64 150 IPR009009 -
Arst2g00162 253 PRINTS Expansin/Lol pI family signature 143 159 IPR007118 GO:0005576
Arst2g00162 253 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Arst2g00162 253 PRINTS Expansin/Lol pI family signature 197 211 IPR007118 GO:0005576
Arst2g00162 253 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Arst2g00162 253 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Arst2g00162 253 PRINTS Expansin/Lol pI family signature 235 249 IPR007118 GO:0005576
Arst2g00162 253 SUPERFAMILY PHL pollen allergen 157 249 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g00162 Arst-Chr2 1401798 1403536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g00162 4 253 Expansin Gene Family AT5G39280 54.800 5.96e-103 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g00162 - - csav:115700526 339.732